Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g03704 | ATGATTGTCAAACGCTTGTTAATTTGCAAGGTTAATAGGCCTCCACTATCGTTGTCAAGGTTGATTAAGTTCATGAAGGGCAAGACTGGACAAGCAAGAATAGAGAAGGCAGGTGGTGAATGCTTGACATTTTATCAGTTGACTACTAGGGCCACTTTAGGACAGAACATGGTTGTCGCAATTAAGCAACTTGACCCAAATGGACTGCAAGGGAATAGGGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCACCCTAACCTTGTCAACCTGATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTGCACGATATTGCTCCTGGAAAGAAACGACTTGACTGGAATACACGAATGAAAATAGCTGCTGGGGCAGCAAAGGGATTGGTTGATGATTTAAAAGCAGCAGAACATAAAATGAATTGCCAACTGCTCACACCAATCCTTAGACCATTCTACGAGTGA | 513 | 0.4172 | MIVKRLLICKVNRPPLSLSRLIKFMKGKTGQARIEKAGGECLTFYQLTTRATLGQNMVVAIKQLDPNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDIAPGKKRLDWNTRMKIAAGAAKGLVDDLKAAEHKMNCQLLTPILRPFYE. | 171 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g03704 | 170 | SUPERFAMILY | Ribosomal proteins L15p and L18e | 3 | 59 | IPR036227 | - | |
Seca10g03704 | 170 | Gene3D | Transferase(Phosphotransferase) domain 1 | 32 | 146 | - | - | |
Seca10g03704 | 170 | ProSiteProfiles | Protein kinase domain profile. | 18 | 170 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g03704 | 170 | PANTHER | OS07G0668900 PROTEIN | 52 | 145 | - | - | |
Seca10g03704 | 170 | Pfam | Protein tyrosine and serine/threonine kinase | 53 | 145 | IPR001245 | GO:0004672|GO:0006468 | |
Seca10g03704 | 170 | SUPERFAMILY | Protein kinase-like (PK-like) | 50 | 145 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g03704 | Seca-Chr10 | 71891727 | 71894111 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g03704 | 57 | 145 | Glycoside Hydrolase | AT3G07070 | 76.404 | 3.70e-42 | 143 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Seca10g03704 | PK_Tyr_Ser-Thr | 2.2e-14 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g03704 | - | - | cpap:110809902 | 178.718 |