Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03661 ATGGGAAGGGCTCCTTGCTGTGACAAAGCCAACGTCAAGAAAGGACCATGGTCTCTTGAAGAAGATTCCAAAATCAAGTCTTACATTGAGCTGCATGGCACCGGTGGTAATTGGATTGCCCTACCACAGAAGATAGGCCTTAAGAGATATAGTAAAAGCCGTTGTCTTAAATGGTTGAATTATCTTCGCCCAAACATTAAACATGGGGTTTCTCTGAAGAGGAAGACAACATCATCTGCAGCCTCTATGTTAGTATTGGAAGCAGCAACACAGTTACCAGGCCGCACATATTATGACATAAAGAACTACTGGAACAGAAGGCTGAAGAAGAAGTTTCTAGGCAAGCAAAGGAAGGAGCAAGTTCGCAGAGTAAGCAATAACTTGAAGCAAGAGATGAAAAGAGAAACGGAGAATTTCACGGTGTCTTCTGCTTCAGGAATACAACCTCCCTATTGGACTCCACAATATTCCATCCCAGTGCCAAATAATATTTCATCCATCCAACAATGTGATCTCAACACTAATCAAACATCCTTCCTCAATAACAAACTTCCTTCAGGCGCTGGAATTAGATTCTCCCTGCAGGATCATCAACAGCCATACACAATCACTCCCACCACCACCATTAATTCACAAGATGCATGTGGCATTCCCTCCACACATTGA 666 0.4294 MGRAPCCDKANVKKGPWSLEEDSKIKSYIELHGTGGNWIALPQKIGLKRYSKSRCLKWLNYLRPNIKHGVSLKRKTTSSAASMLVLEAATQLPGRTYYDIKNYWNRRLKKKFLGKQRKEQVRRVSNNLKQEMKRETENFTVSSASGIQPPYWTPQYSIPVPNNISSIQQCDLNTNQTSFLNNKLPSGAGIRFSLQDHQQPYTITPTTTINSQDACGIPSTH. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03661 221 FunFam Transcription factor RAX3 7 68 - -
Seca10g03661 221 CDD SANT 16 62 IPR001005 -
Seca10g03661 221 Gene3D - 7 68 - -
Seca10g03661 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Seca10g03661 221 PANTHER OS09G0431300 PROTEIN 1 205 - -
Seca10g03661 221 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Seca10g03661 221 Coils Coil 118 138 - -
Seca10g03661 221 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Seca10g03661 221 SMART sant 13 110 IPR001005 -
Seca10g03661 221 Gene3D - 86 140 - -
Seca10g03661 221 SUPERFAMILY Homeodomain-like 14 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03661 Seca-Chr10 69946663 69947647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03661 1 119 MYB Transcription Factor Family AT3G49690 67.742 2.26e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca10g03661 Myb_DNA-binding 2.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03661 K09422 - gmx:106795158 219.55