Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03643 ATGGAAGGGAATTTGTCACAGGGAGGTATCGTTCAAGGTGGGTCTTCTTTTGGTGGTTTTGATTTGCCTGGATCAATGAGGGTTCATCGTCAAGCACAACATTCACATACCATCAACCAACATCAAACTCATCCTTGCCAAGGGTCTTCAGTGCATTCCTCAATTCATGATGGTTTTCCTCTTACAATGGGAACGATGCAGAGCTGTGATCAAACTATGTCAATGACAGAGTTTAGTCAGGGAGATAGAAACAAAAACTCAGCAAGTGAGGAAGATGAGCCAAGCTTTGCTGAGGAAGGTGTTGATGGTCATCATGAAGTGAGTAGAGGGAAAAAGGGGTCACCTTGGCAGCGGGTTAAGTGGACTGATAAGATGGTGAAGCTTTTGATAACAGCTGTGTCCTATATAGGCGAGGATGCAACTTCTGATGGTGGCGGAAGAAGAAAATTTGCAGTCCTGCAGAAAAAGGGAAAGTGGAAATCTGTTTCCAAGGTCATGGCTGAAAGAGGTTATCATGTTTCTCCTCAGCAGTGTGAGGATAAATTCAATGATCTTAATAAAAGGTACAAAAGGCTTAATGATATGCTTGGGAGGGGCACTTCATGTCAAGTTGTTGAAAATCCTGCTCTGTTGGATGTAATAGATTATCTTTCTGAGAAAGAAAAGGATGATGTTCGAAAAATATTAAGCTCAAAACATCTCTTCTATGAAGAGATGTGTTCTTACCATAATGGTAATAGATTACATTTACCCCATGATCCTGCATTGCAACGTTCGTTGCAGTTAGCTCTTCGAAATAGAGATGATCATGATAATGATGATATCAGAAGGTCCTATCATGATGATCATGATGAAGATGATCAAGATGTGGAAACTGATAATCATGATGACTTCGAAGAGAATTATGCTTCCCATGGAGATAGTAGAGGACTCTTTGGGGGAATGGGGGGATCTATGAAAAGACTTAAACAAGGGCAAGGCCAAGAAGATGCTACTACATTTGGGACTTCTTTAAATAGTCAGGAGTACAACAAAGGTTCCTATCCTCAAGGACAAATGGTTCAATCTGACATGAATCAAGCTTTACCTGAAAGCATGAGAGCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGCTCACTTCAGTTAGAAGAACAGAAGCTACAAATTCAGGTTGAGATGCTGGAACTAGAGAAACAAAGATTCAAGTGGCAGAAGTTTAGTAAGAAAAAAGACCGTGAGTTGGAGAAGTTGAAGCTGGAGAATGAAAGAATGAAGCTTGAGAATGAACGTATTGGATTAGAACTAAAGCGAAAAGAAATGGGCACTGGCTTTAACTAG 1341 0.4064 MEGNLSQGGIVQGGSSFGGFDLPGSMRVHRQAQHSHTINQHQTHPCQGSSVHSSIHDGFPLTMGTMQSCDQTMSMTEFSQGDRNKNSASEEDEPSFAEEGVDGHHEVSRGKKGSPWQRVKWTDKMVKLLITAVSYIGEDATSDGGGRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDIRRSYHDDHDEDDQDVETDNHDDFEENYASHGDSRGLFGGMGGSMKRLKQGQGQEDATTFGTSLNSQEYNKGSYPQGQMVQSDMNQALPESMRAAWLQKQWVESRSLQLEEQKLQIQVEMLELEKQRFKWQKFSKKKDRELEKLKLENERMKLENERIGLELKRKEMGTGFN. 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03643 446 Gene3D - 121 191 - -
Seca10g03643 446 Coils Coil 378 400 - -
Seca10g03643 446 MobiDBLite consensus disorder prediction 270 311 - -
Seca10g03643 446 Pfam Myb/SANT-like DNA-binding domain 118 242 IPR044822 -
Seca10g03643 446 Coils Coil 408 437 - -
Seca10g03643 446 FunFam Sequence-specific DNA binding transcription factor 121 191 - -
Seca10g03643 446 MobiDBLite consensus disorder prediction 270 284 - -
Seca10g03643 446 PANTHER F16F4.11 PROTEIN-RELATED 1 443 - -
Seca10g03643 446 MobiDBLite consensus disorder prediction 30 83 - -
Seca10g03643 446 MobiDBLite consensus disorder prediction 84 115 - -
Seca10g03643 446 MobiDBLite consensus disorder prediction 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03643 Seca-Chr10 69617344 69618684 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca10g03643 Myb_DNA-bind_4 1.8e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03643 - - gmx:100816474 739.184