Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03642 GGAACGAGCTCGGGCCCATTAGTTGTTAGGAGCAACAAAGGGAAAAGAGAAAGAGTCTCAAGCTGGCTCTGTGGACATGGGCGAAGCCAAGATTTATACTTTCCAGCTTTATCTGCAGCTACTGCAATCATTTCCTTCAATTATTTTTCTGCACTTCATAAGGAAAAGTATGACGATAAATGGTTTGGAATTGATGATTCCTCTGGCATTCTTTGCTGCAACTGGGGACCTACCTATCTTGTTCGTGAGGGTGATCCTGTGAATGAGATGCTCTTCATAATTAGAGACCATCTTGATTCTTACACCACAAATGGAGGCCGTGCTGGATTCTTCAACTCATGCCGTATTGGGCCACGTGATTTCTGTGGTGAAGAGCTATTAACATGGGCCTTAGACCCAAGACCAAGTGTGATACTCCCATCTTCCACTAGAACAGTTAAAGCCATATCAGAAGTAGAGGCCTTTGCACTTATAGCTGAAGACTTAAAATTTGTTGCATCTCAATTTAGAAGACTACACAGTAAACAACTGAGGCATAAATTCAGGTTTTACTCACACCAATGGAGAACATGGGCTGCTTGTTTCATTCAAGCTACATGGAGACGACACAAGAAAAGGAAAGAAGATGCTGAATTAAGGGCCAGGGAGAATCTAACAGCTTCTGAGCCTAAAACACCAACATCTGGTTCAGGCTTTGGGTGGGAAGCCAACATGGAAAGACAAAGGGGAGTTACAGTAGCACCAGTGACACCAGCTATGACAAGATGA 768 0.4349 GTSSGPLVVRSNKGKRERVSSWLCGHGRSQDLYFPALSAATAIISFNYFSALHKEKYDDKWFGIDDSSGILCCNWGPTYLVREGDPVNEMLFIIRDHLDSYTTNGGRAGFFNSCRIGPRDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQATWRRHKKRKEDAELRARENLTASEPKTPTSGSGFGWEANMERQRGVTVAPVTPAMTR. 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03642 255 Gene3D Jelly Rolls 76 171 IPR014710 -
Seca10g03642 255 MobiDBLite consensus disorder prediction 211 235 - -
Seca10g03642 255 MobiDBLite consensus disorder prediction 220 234 - -
Seca10g03642 255 ProSiteProfiles IQ motif profile. 189 217 IPR000048 GO:0005515
Seca10g03642 255 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 78 221 - -
Seca10g03642 255 CDD CAP_ED 78 184 IPR000595 -
Seca10g03642 255 SUPERFAMILY cAMP-binding domain-like 78 171 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03642 Seca-Chr10 69609643 69612992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03642 78 218 Ion Channels AT2G28260 87.234 5.99e-84 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03642 K05391 - gmx:100811847 281.182