Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03636 ATGAAGAGTTTGCTAGGCTGTATGGCAATCTTGGAAAAACATAAACCTTATGTTGCAATGCTCTTCATTCAGTTTGTATATGCAGGAATGGCTCTGTTATCTAAGGCAGCAATTTCAAAGGGAATGAGCCCTTATGTGTTTGTTGTTTATAGACAAACCTTTGCATCACTTGCCTTATCTCCATTTGCTCTCTTTGACAGTAAGCATGCTGCTCCTTTGTCATGCAACTTGTTGTGCAAGTTGTTTCTAATTTCCCTTGTTGGGCTAACAGCAAGTTCAAACCTTTACTATGTTTCAATCAACTATACCTCTGCAACCTTTGCTGCAGCAAGCACAAACACTGTCCCTTCTATTACTTTCATCATGGCAGCTTTAATTGGGATGGAAAGCATTTCAATAAAACATATGCATGGTGTGGCTAAGATTTTAGGTTCTGTTCTGAGCCTTTCAGGGGCAATAGTATTTGCTCTAGTCAAAGGACCTCCTTTACATTTTATGAATTGGTATCCAGAAAATCAGAACCAAAATTCTCATTCATTAACAACAGTTCACTCCAAAGGGGATTGTATTAAAGGCTCTCTTATGATGCTCTCAGCTAACACTGCTTGGTCCTTGTGGCTTATTTTACAGGGATTTGCTGTGAAGCAATACCCAGCAAAATTTCGCCTCACTATTCTACAATGTTTTTTTAGCTTCATACAGTCAGCTATTTTGGCTGTTGTAGTGGAGAGGAATCCTTCTGCATGGAGGCTTGGATGGGATTTTCATCTTCTTTCAGTGGCTTATTGTGGTGTAATTGTAACAGCCATTTGTTATTGGTTGCAAGTTTGCACGATAGAGACGAAAGGTCCAGTTTTCACAGCAATGTTCACCCCTCTAGCTCTCGTAATCACAGCAATATTCTCAGCACTATGTTGGAAAGAAACACTTCACTGGGGAAGGTTCATATTCTCTTCTTCCTATTTCAAAACAGTTATTAAATGTTGA 987 0.3921 MKSLLGCMAILEKHKPYVAMLFIQFVYAGMALLSKAAISKGMSPYVFVVYRQTFASLALSPFALFDSKHAAPLSCNLLCKLFLISLVGLTASSNLYYVSINYTSATFAAASTNTVPSITFIMAALIGMESISIKHMHGVAKILGSVLSLSGAIVFALVKGPPLHFMNWYPENQNQNSHSLTTVHSKGDCIKGSLMMLSANTAWSLWLILQGFAVKQYPAKFRLTILQCFFSFIQSAILAVVVERNPSAWRLGWDFHLLSVAYCGVIVTAICYWLQVCTIETKGPVFTAMFTPLALVITAIFSALCWKETLHWGRFIFSSSYFKTVIKC. 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03636 328 Pfam EamA-like transporter family 15 149 IPR000620 GO:0016020
Seca10g03636 328 Pfam EamA-like transporter family 191 317 IPR000620 GO:0016020
Seca10g03636 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 149 - -
Seca10g03636 328 PANTHER WAT1-RELATED PROTEIN 15 316 IPR030184 GO:0016020|GO:0022857
Seca10g03636 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03636 Seca-Chr10 68780620 68784673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03636 9 317 Nodulin-like Gene Family AT1G21890 35.127 2.88e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03636 - - lja:Lj0g3v0009669.1 528.48