Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03626 ATGAAGAATGAAAGTTTGCAATATATGTTGGACAAAGTTAAAAGTGGTGAAGGGGAGTTGGATTGGTTATCAACACACAAGATTGCACTTGGTGTAGCTGCTGGCCTTGAATACCTTCACATTAGTGACCGTCCAAAAATAATTCAAAGAGACCTCAAGCCTGCAAACATTCTTCTTGATGAAGATATGGAAGTTAGGATAATAGACTTTTGCCTTGCAAAATTGATGTCAAAATATAAGGCACACATCACAATGTCTAACGTAGCTAGCACTACGGGATATATAGCACCTGAGTATCACCAGATACTCAAATTCACTTATAAGTTTGACATATACAACTTTGGTCAAATATAA 354 0.3644 MKNESLQYMLDKVKSGEGELDWLSTHKIALGVAAGLEYLHISDRPKIIQRDLKPANILLDEDMEVRIIDFCLAKLMSKYKAHITMSNVASTTGYIAPEYHQILKFTYKFDIYNFGQI. 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03626 117 SUPERFAMILY Protein kinase-like (PK-like) 1 116 IPR011009 -
Seca10g03626 117 FunFam Os07g0541700 protein 1 91 - -
Seca10g03626 117 Pfam Protein kinase domain 7 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03626 117 Gene3D Transferase(Phosphotransferase) domain 1 1 117 - -
Seca10g03626 117 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03626 117 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03626 Seca-Chr10 68101566 68101919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03626 1 117 Receptor kinase-like Gene Family AT2G31880 61.538 7.09e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Seca10g03626 Pkinase 3.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03626 - - gmx:100811980 171.785