Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03625 ATGAAGAATGAAAGTTTACAGGATATGTTGGACAAAGTTAAAAGGGGTGAAGGGGAGTTGGATTGGATATCAACGCACAAGATTGCACTGGGTGTAGATGCTGGCCTTGAATACCTTCACATTAGTGACAGTCCACAAATAATTCATAGAGACCTCAAGCCTGCAGACTTTCTTCTTGACGATGATATGGAAGCTCCCAAGTCTAGCAAAAGAAAACTAGTTGGGTGGATTGTTGGGTTTGTGGTTGGTGCACTAGCTGGGACTCTTTTTGAGTTCATATTTTCCTTGTTGGTAAAGTTGGCTTTAGCTTTGATCAAGGGAGAGGCGAGATGGGTTGGCTATGACCCTACAACTTATAGTTTCTTGATTAAGAAAGATGAGGAGTTGGTTCTCTTAGTGAAGCAAGATGGATTGGCTTCTTCGAAAATCAATGTAAGAAGTGGGTGTGGGGAGGTTTACAAGGTCGAATTACCTAAAAGTAATGGCATAATAATTTCCATAAAGAAGATTGTTCAGCCTCCCAAGGATGCAGCTGAGTTGGTTGAAAAATAA 552 0.4094 MKNESLQDMLDKVKRGEGELDWISTHKIALGVDAGLEYLHISDSPQIIHRDLKPADFLLDDDMEAPKSSKRKLVGWIVGFVVGALAGTLFEFIFSLLVKLALALIKGEARWVGYDPTTYSFLIKKDEELVLLVKQDGLASSKINVRSGCGEVYKVELPKSNGIIISIKKIVQPPKDAAELVEK. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03625 183 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 65 - -
Seca10g03625 183 Gene3D Transferase(Phosphotransferase) domain 1 1 80 - -
Seca10g03625 183 ProSiteProfiles Protein kinase domain profile. 1 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03625 183 SUPERFAMILY Protein kinase-like (PK-like) 1 64 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03625 Seca-Chr10 68079822 68080563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03625 1 65 Receptor kinase-like Gene Family AT2G31880 64.615 7.39e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Seca10g03625 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03625 - - gmx:100811980 144.821