Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03624 ATGCTAGCTCATGTATGTGGGACAGATTGCAACTGCCTTGTTTATGAGTTCATGAAGAATGAAAGTTTGCAGGATATGTTGGACAAAGTTAAAAGGGGTGAAGGGGTGTTGGATTATTTATCAACGCACAAGATTGCACTTGGTGTAGCTTCTAGCCTTGAATACCTTCACATTAGTGACAGTCCACAAATAATTCAGAGAGACCTCAAGCCTGCAGACATTCTTCTTGACAATGATATGGAAGTTAGGATAACAGACTTTGGGCATGCAAAATTGATGTCAAAATATAAGACACACATCACAATGTCTAATGTGGCTGGCACTGTGGGATATATAGCACCTGAGTATCACCAGATACTCAAATTCACTTATAAGTGTGACATATACAGCTTTGGTGTCATATAA 405 0.3901 MLAHVCGTDCNCLVYEFMKNESLQDMLDKVKRGEGVLDYLSTHKIALGVASSLEYLHISDSPQIIQRDLKPADILLDNDMEVRITDFGHAKLMSKYKTHITMSNVAGTVGYIAPEYHQILKFTYKCDIYSFGVI. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03624 134 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03624 134 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 134 - -
Seca10g03624 134 SUPERFAMILY Protein kinase-like (PK-like) 7 134 IPR011009 -
Seca10g03624 134 Gene3D Transferase(Phosphotransferase) domain 1 2 134 - -
Seca10g03624 134 Pfam Protein kinase domain 11 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03624 Seca-Chr10 68078099 68078503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03624 1 134 Receptor kinase-like Gene Family AT2G31880 61.940 4.72e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Seca10g03624 Pkinase 1.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03624 - - gmx:100811980 201.06