Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03620 ATGGATGGACGAGAAGAAGAGGGACACAGACAAGAATTAAAGCAGAAAGAGAAGGTGGTAGATCTTTCTAACCATTGGTTACCTAATCAGAGACTCGTTGCTATTGATATTTTGAAAGTACAGTTCTTTGAATCGTTGGAAGAGGTGGGTGTGGGCTGGTTTACAAGGTTGAATTACCTAGAAATTCGATTTGATATTAACATTGTTGGTCATATTCGACACCGGAACCTCGTGTCTCTGCTAGCTCACGTGTGTGGGACGGATTGCAACTGCCTTGTTTATGAGTTCATGAAAAATGAAAGTTTGCAGGATATGTTGGACAATGTTAAAAGAGGTGAATGGGAGTTGGATTGGTTGTCAACGCACAAGATTGCACTTGGTGTCTTATACTCTGGCATCACTTTTGCAAGTCCAAAGTATGTTATCCTAGCTTCCATTTAA 441 0.4059 MDGREEEGHRQELKQKEKVVDLSNHWLPNQRLVAIDILKVQFFESLEEVGVGWFTRLNYLEIRFDINIVGHIRHRNLVSLLAHVCGTDCNCLVYEFMKNESLQDMLDNVKRGEWELDWLSTHKIALGVLYSGITFASPKYVILASI. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03620 146 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 61 129 - -
Seca10g03620 146 Gene3D Transferase(Phosphotransferase) domain 1 19 134 - -
Seca10g03620 146 SUPERFAMILY Protein kinase-like (PK-like) 29 129 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03620 Seca-Chr10 68061990 68062534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03620 61 128 Receptor kinase-like Gene Family AT2G31880 58.824 2.74e-21 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Seca10g03620 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03620 - - rcu:8278249 98.2117