Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03619 ATGTCCCTGTTCTTCTCATCCATCCATGCAAAGTTTGATCTCCACCCTTCAGACTCAAAGGCTCCCAAGTCAAGCAAAAGAGAACTAGCTAGGTGGTTTTTTGGGTTTGTGGTAGGTGCACTAGTTAGGAATCTTTTTAGGTTCATATTTTCCTTATTGGACAAGTTATCTTTGGCTTTGATAATGGGAGAAGTGAAATGGGTTGGCTCTAGCGCTACAATTTATAGTCCCTTGATTAAGAAAGCTGACGACTTGGTGTTCTTAGAGAAGCAAGATGGATTGGATTCTTTGCAAATCGTTGGAAGAGGTGGGTGTAGGGAGGTTTACAAGGCTAAATTACCTAGAAGTAACGACAAAATGAATGCCATAAAGAAGACTGTTAAGACACCCAAGGAAGCAACTGAGTTGAACCGTGTGCCTCTGCTAGCTCATGTGTTTGGGAGGGATTGCCACTACCTGGTTTATGAGTTCTTGAAGAATGGACGTTTGGAGGATATGTTGGACAAAGTTAAAAGGGGTGAAGCAGAGTTGGATTGGTCAACAACGCACAAGATTGCACTCGATGTAGCTGTTGGCATTGAATACCTTCACACAAAACATAGTCCACAAATAATTCATAGAGACCTCTGA 630 0.4206 MSLFFSSIHAKFDLHPSDSKAPKSSKRELARWFFGFVVGALVRNLFRFIFSLLDKLSLALIMGEVKWVGSSATIYSPLIKKADDLVFLEKQDGLDSLQIVGRGGCREVYKAKLPRSNDKMNAIKKTVKTPKEATELNRVPLLAHVFGRDCHYLVYEFLKNGRLEDMLDKVKRGEAELDWSTTHKIALDVAVGIEYLHTKHSPQIIHRDL. 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03619 209 SUPERFAMILY Protein kinase-like (PK-like) 85 209 IPR011009 -
Seca10g03619 209 Pfam Protein tyrosine and serine/threonine kinase 117 209 IPR001245 GO:0004672|GO:0006468
Seca10g03619 209 Gene3D Transferase(Phosphotransferase) domain 1 78 209 - -
Seca10g03619 209 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 34 209 - -
Seca10g03619 209 ProSiteProfiles Protein kinase domain profile. 94 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03619 Seca-Chr10 68049862 68050572 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03619 29 209 Receptor kinase-like Gene Family AT2G31880 47.847 2.88e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Seca10g03619 PK_Tyr_Ser-Thr 1.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03619 - - gmx:100811980 222.246