Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03617 ATGAAGAATGGAAGTTTGCAGGATATGTTGGAAAAATTTAAAAGTGGTGATGGGGAGTTGGATTGGTTATCAACTCACAAGATTGCACTTGGTGTGGCTATTGGCCTTGAATACCTCCACATGAGTCACAGTCCACAAATAATTCATAGAGACCTCAAATATGCAAACATTTTTCTTGATGATGAGATGGAAGCTAGGATATTAAACTTTGGGCTTGCAAAAGTGATGCTAGAGTATAAGACACACATCACAATGTCTAATGTAGCTGGCAATGTGGGATATATAACACCTGAGTATCACCAGATACTCAAATTCACTTATAAGTGTGACATATACATCTTTGGGGTAATACTTGGTGTCTTGGTGATAGGAAAGCTTCCATCAGATGAGTTTTTTGAGCACACAGACCAAATTAAGAAGAAAAGTGAGGAAAGTCTCCAAATAAAATTTCCACGAAAACATCTTGCATTCTATTTGGGAAAGTGA 486 0.3724 MKNGSLQDMLEKFKSGDGELDWLSTHKIALGVAIGLEYLHMSHSPQIIHRDLKYANIFLDDEMEARILNFGLAKVMLEYKTHITMSNVAGNVGYITPEYHQILKFTYKCDIYIFGVILGVLVIGKLPSDEFFEHTDQIKKKSEESLQIKFPRKHLAFYLGK. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03617 161 Gene3D Transferase(Phosphotransferase) domain 1 1 156 - -
Seca10g03617 161 SMART serkin_6 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03617 161 FunFam Os07g0541700 protein 1 91 - -
Seca10g03617 161 Pfam Protein kinase domain 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03617 161 SUPERFAMILY Protein kinase-like (PK-like) 1 140 IPR011009 -
Seca10g03617 161 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 136 - -
Seca10g03617 161 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03617 161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03617 Seca-Chr10 68041515 68042000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03617 1 138 Receptor kinase-like Gene Family AT2G31880 68.116 2.61e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Seca10g03617 Pkinase 5.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03617 - - gmx:100811980 223.787