Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03595 ATGCAAGAGGTAGATAATAGGAATAATGAGGGTTATGGTGAAAATAGCTTGAAATCCAGTAATGAAGCCATTGTTTGTTCTGATGAGGTTGTTCCTGATGTGTACAAAAGGATTTTTGAGTTAAGTGATGATGATATTAGATTGCCTGAGTTTGATTCTGAACAGGATGCATATGAATTCTATAGTGAATATGCGAAATTAAAAGGCTTTGTTGTTAGGAAAGATGATGTTTATCGTGATCGTAATAAGCATATTACAATGAGGCAATTGGTATGTAATATGCAGAGGGAAGGAGTGAGAAGCATTTAA 309 0.343 MQEVDNRNNEGYGENSLKSSNEAIVCSDEVVPDVYKRIFELSDDDIRLPEFDSEQDAYEFYSEYAKLKGFVVRKDDVYRDRNKHITMRQLVCNMQREGVRSI. 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03595 102 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 43 95 - -
Seca10g03595 102 Pfam FAR1 DNA-binding domain 59 100 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03595 Seca-Chr10 67411069 67411377 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g03595 FAR1 5.6e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03595 - K17604 ccaj:109792835 74.3294