Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03579 ATGGCTAGGATTAGTGCAAGTAGACCATCTTCGCTCTACTCATTGCTCTTGATTTGTTCACTTCTATTGGCTTCTCAAATCCTTGTCTCCTCTCGTAAGTTAGCAAGGCCTCCAATTGTGAAGGGACTATCATGGGATTACTATTGGTTGTCATGTCCCAGGGTTGAAAGGATTATAAGGAAACATCTCGAGGATGTCTTTGAGAGGGACAGTGGCATAGCTCCTGGCATACTTCGGCTTTTCTTCCATGATTGCTTTGCTCAGGGATGTGATGGATCAATATTGTTGAATGGTGATGGAGAAGATGATGAAAAGCAACACGTTGCTAACTTTGGTTTGAGGGAAGAGGCACTTCAGACCATTGAAGATCTTAGGGCTCTTGTCCGTAAGCAGTGTCCAAGGGTTGTCACGTGCTCAGACATCCTTGTTATTGCCGCACGCGAAGCTGTTCGCCAATTAGGAGGCCCTGATTTTGATGTGCCACTGGGAAGAAAAGACAGCTTGACTTTCAATGTAACTGCACCAGACAATCTTCCACCACCATTTTTTCGAACGGATGAACTACTTGGTCTTTTTGGATCCAGAAACTTCGATGCCACAGATGTAGTTGCCCTCTCAGGTGCACACACTTATGGTCGAGCCCATTGTCCCTCATTATTCAACAGAACCATAGAATCAGACCCACCAATAGACCCAGAATTTAAGAAACAACTTGAAGCCACGTGTCCAAATGATGAATCCCTCAACACTATTAATTTGGATGTTAGGACTCCTGTCAAGTTTGATAACATGTACTACATTAACCTCTTGAACCGTCAGGGTGTGTTCACTTCTGACCAGGACATAGCCTCTCATCCAGAAACTAAGGAGACAGTGAACCTCTTTGCTTCCAACCAGAAAGCGTTTTTTGACAAATTTGCTGATGCTTTTGTGAAGGTGAGCCAGTTGAGTGTGTTGACTGGAGATCAAGGAGAAGTTCGCAAGACATGTTTTGCGCCAAATAACAGGAAATCTAGGATGTCATCTGTGGTTGAACAAGTGCTGGAATTGGCTGAGAAGCTCTAA 1065 0.4423 MARISASRPSSLYSLLLICSLLLASQILVSSRKLARPPIVKGLSWDYYWLSCPRVERIIRKHLEDVFERDSGIAPGILRLFFHDCFAQGCDGSILLNGDGEDDEKQHVANFGLREEALQTIEDLRALVRKQCPRVVTCSDILVIAAREAVRQLGGPDFDVPLGRKDSLTFNVTAPDNLPPPFFRTDELLGLFGSRNFDATDVVALSGAHTYGRAHCPSLFNRTIESDPPIDPEFKKQLEATCPNDESLNTINLDVRTPVKFDNMYYINLLNRQGVFTSDQDIASHPETKETVNLFASNQKAFFDKFADAFVKVSQLSVLTGDQGEVRKTCFAPNNRKSRMSSVVEQVLELAEKL. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03579 354 FunFam Peroxidase 179 313 - -
Seca10g03579 354 ProSiteProfiles Plant heme peroxidase family profile. 42 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Seca10g03579 354 PANTHER - 28 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 Gene3D Peroxidase, domain 2 180 314 - -
Seca10g03579 354 FunFam Peroxidase 46 181 - -
Seca10g03579 354 Pfam Peroxidase 60 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 Gene3D - 46 330 - -
Seca10g03579 354 SUPERFAMILY Heme-dependent peroxidases 38 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 CDD secretory_peroxidase 42 332 IPR033905 GO:0004601|GO:0042744
Seca10g03579 354 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Seca10g03579 354 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03579 354 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03579 Seca-Chr10 66953683 66956774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03579 4 351 Peroxidase AT1G71695 47.472 7.02e-112 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03579 K00430 - gmx:100795412 493.812