Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03578 ATGACTTCTTTCTACTCTTTGCTCTTCATTTCTTCCATTGTGTTGTTTAGTTCACACTGCCATGCCTCTGAGGCACAAGCCAAGCCCCCATTAGTAAAGGGACTTTCTTTTTCTTTCTATTCCAAAACCTGTCCCAACCTTGAAACCATTGTGAGAAACCATCTCAAGAAGGTCTTCAATCAGGACAATGGCCAAGCTCCTGGCTTACTTCGCATCTTTTTCCATGATTGCTTTGTTCAGGGATGTGATGGGTCGGTGCTGTTGGATGGGAGTCCAGGTGAAAGGGATCAACCAGCCAACGGAGGCATTAGAACGGAGGCTTTGCAAACCATTGAGAACATCAGGTCTCTTGTCCACAATCAATGTGGAAGGATTGTCTCCTGTGCTGATATCACTGTCCTGGCTGCTCGTGATGCTGTTTTCCTATCAGGAGGCCCAGATTATGCAGTTCCATTAGGAAGAAGAGATGGCCTAAACTTCAGCACAGCAGGAACAAACAATCTTCCATCACCCTTCAACACAACAAGTGTGACCCTAAAAAATTTTGCATCCAAAAACTTTGATGCCACAGATGTGGTTGCCTTATCAGGAGCACACACATTTGGGCGTGCACATTGTGGCACATTTTTCAATAGGCTTTCCCCTTTAGACCCCAACATGGACAAGACCTTAGCCAATAAACTCAAAGCCACATGCCCAGATGCAAACTCAGGCAACACTGCCAATTTGGACATTAGAACCCCAACACTGTTTGATAACAAATACTTCCTTGACTTAATGAATCGCCAGGGTGTGTTTACCTCTGATCAGGACTTGCTTACGGATAAGAGGACTAAAGGGTTAGTGAATGCCTTTGCAGTTAATCAGACATTGTTCTTTGAGAAGTTTGTGGATGCGGTTATTAGGTTGAGCCAATTGGATGTGTTGACCGGAAATCAAGGTGAAATTCGTGCTAAATGCAATGTCATAAATAATAGGAAATCTATGTTGGAAACTGTGGTGGAAGAGGTGGTTCAATTAGCTGATCAATTTTAA 1035 0.4357 MTSFYSLLFISSIVLFSSHCHASEAQAKPPLVKGLSFSFYSKTCPNLETIVRNHLKKVFNQDNGQAPGLLRIFFHDCFVQGCDGSVLLDGSPGERDQPANGGIRTEALQTIENIRSLVHNQCGRIVSCADITVLAARDAVFLSGGPDYAVPLGRRDGLNFSTAGTNNLPSPFNTTSVTLKNFASKNFDATDVVALSGAHTFGRAHCGTFFNRLSPLDPNMDKTLANKLKATCPDANSGNTANLDIRTPTLFDNKYFLDLMNRQGVFTSDQDLLTDKRTKGLVNAFAVNQTLFFEKFVDAVIRLSQLDVLTGNQGEIRAKCNVINNRKSMLETVVEEVVQLADQF. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03578 344 Gene3D Peroxidase, domain 2 170 304 - -
Seca10g03578 344 FunFam Peroxidase 169 303 - -
Seca10g03578 344 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Seca10g03578 344 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 SUPERFAMILY Heme-dependent peroxidases 34 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 ProSiteProfiles Plant heme peroxidase family profile. 34 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 PANTHER - 11 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 Pfam Peroxidase 51 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g03578 344 CDD secretory_peroxidase 34 323 IPR033905 GO:0004601|GO:0042744
Seca10g03578 344 FunFam Peroxidase 38 179 - -
Seca10g03578 344 Gene3D - 39 321 - -
Seca10g03578 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03578 Seca-Chr10 66935383 66940427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03578 1 340 Peroxidase AT1G71695 52.101 1.53e-128 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03578 K00430 - gmx:547550 585.104