Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03515 ATGGCTGGGCAAGCATCAATGATCTCCTCTTCCTTTAGTTATCAGTGGAAATACGATGTGTTTCTCAGCTTCAGAGGCATAGATACTCGACGTGGTTTTACTGGCTATCTTTATAAAGCTCTCAAAGACAAGGGAATTCACACTTTTATTGATGATGAGGAGCTTCAGAGAGGAGAGAAAATCACACTATCACTTGTCAAGGCAATTGAAGAGTCAAGAATTGCCATTCCTGTGTTCTCTGAGAACTATGCTTCTTCCTCATTTTGCCTAGATGAACTTGTTGTCATCCTTGCCTCCATTAAGGAAAAGGGTAGGATGGTTTTGCCAGTCTTTTATGACGTGGATCCTTCTGATGTGCGACATCAGAGAGGTAGCTATATGAAAGCACTAGCTAACCATGAGGAGAGGTTCAAGGATAACAAGGAGAAGGTGAACAAATGGAGGGAGGCTCTGCGTCAAGTGGCTGATTTGTCTGGCTATCATTTAAAAAAACATGGGAATGAGAATGAATATGAGTTTATTGGAAAGATTGTTAAAGAGATCTCTAACAAAATTATTCGTGCTCCTTTACATGCTGCTGATTACCCAATTGGATTGGAGTCTCGAGTACTAAAAGTAAACTCACTACTAAATTTCAAATCTGATGGAGTCCACATAGTAGGGATTCATGGAATTGGTGGAATAGGTAAAACAACACTTGCTCGATCAGTTTATAATTCGATCGCTGATCAATTTGAAGGTTTGTGTTTTCTTGATAATGTGAGAGAAAATTCAATTAAATATGGGTTAGTACATCTTCAACAGACACTTCTTTCTGAAATGGTTGGAGTGAAGGATATTAACTTGGGGAGTGTTAGTAAAGGAATTCCAATAATAAAGGATAGGATCCACCAAAAAAAAGTTCTTTTGGCTCTTGATGATGTTGATAAACTAGAACAGTTGCGGGCAATAGTTGGAGGACCTGATTGGTTTGATCCTGGCAGCAGAGTCATCATTACAACTCGGGACAAGCATTTGTTGACAAGTCATGGGGTTAATGAAACATATGAGGTAGACGGGTTGAATAAGAAAGAAGCTCTTGAATTGATCAGTTGGAATGCTTTTATAACTAACAAAGTTGATCCAAGTTATTTAGACATTTTAAATCGTGCACTAACTTATGCTTCTGGCCTTCCATTGGCTTTGGAGGTAATTGGTTACCACTTATGTGGAAGGAGGATGGAAGAATGGGAATCTTCATTAGATCAGTATAAAAGAATTCCTAATAAAGATATCCAAAACATACTTAAAGGAAGCTTTGATTCTTTGGAGGAAGATCAACAGAAATTTTTTCTTGATATAGCTTGTTGCTTCAAAGGATATGCTTTGTCATATGTCAAAAAAATACTTTGTGGTCATCATGGTTTCTGCCCAGAATTTGGTATTGGAGTTTTGATTGAAAAGTCTCTCATAAAAATAAATGTGGATGGTCATGTGACATTACATGACTTGAAAAACCTCAAAACTCTTATTATTAGAAATGGTTGTTTTTTCAAAGGTCCTGAACTTCTTCCAAATAGTTTAAGAGTATTGGAATGGTGGAGATATCCATCACCATCTTTACCATCAAATTTTCATCCAAAGAATCTGGTGATATTGGAGTTACCCCAAGGTTGCTTAATGTCACTTGAGTTGCTCATGTCAAACAAGAAGTTTGTGAATATGAGGGTTTTGAATTTTGATGATTGTCAATATATAACAGAGATACCTGGAGTGTCTAGTGTCCCAAATTTAGAAGAATTATCATTTGGAAATTGTGAGAATTTAACTAAAATTCACAAATCGGTTGGATTGCTACATAAGCTTAAAATCTTGAATGCTGATGGTTGCAGCAAGCTTAGAAGTTTTCCACCCATCAAGTTGACCTCTCTTGAAAAACTTAGGCTTTCTTATTGTCACAGTCTTGAGAGTTTTCCAGAAATATTAGAAAAGATGGAAAAGGTCATGATGCTTGATATCATGGGCACTCCCATGAATAAAATTCCAATTTCAATTAAAAAACTCACTCGACTTCAAAAACTAGCATTGAGGGGTTGCGGAATTGTTGAGTTACCTAGTAGCATTTTCAAGATAAGAGAACTTCGTGAGTTGATTGTTGGGGCATGTGAGGGGTTGCAAATATCTGAACAGGACGAAGGTGAAGCACAAGTGAGCTCGATGGTATTTCATAACACTATTGATATTAGACTTTGGCATTGCAATATATTAGATGAATTTTTTCAAATAGGTCTCCTTGTGTTTGCCAATGTAAAAAGGTTATACCTTCATCAGGTGAATCTGACAATTCTTCCTGCATGCATCAAAGAATGTCGCTATTTGACAGAAATTTATTTGGAAGGTTGTGAGAATCTTAAAGATATTAGAGGCATTCCACCCAACAATAAAAAATTCTCTGTAATTAAGTGCACATCCTTGAAAGATTTGGATTTCAAACTCCATGCATGCACCTCTGAAGAATGGTTCTATTTGAAAGAAATTTATTTGGAAGGTTGCTGTAATCTTCAAGAAATTAGAGGCATTCTACCCAACATTGACAAATTCTCAGCAACACAGTGTGCATCCTTGAAAAATTTGGACTTCACACTCCTTGCATGCACTGAAAAATGTTCCTCTTTGAAAGAAATTTATTTGGAAGGTTGCAATAATCTTCAAGAAGTTAGAGGAATTCCACTCGACAATGAAAATTTCATAGGAATAAATTGTGCATCCTTAAAAAGTTTAGATTTCACACTCCTTGTATGCACCAAAAATTGTCGCTTTTTGAAAGACATTTATCTGTATGGTTGTGAGAATCTTCAAGAAATTAGAGGCATTCCACCCAACATTAAACAATTCTCTGTAATTAAGTGCACATCCTTGAAAGATTTAGATTTCAAATTCCATGCATGCACCTCTGAAGAATGGTGCTATTTGAAAGAAATTTATTTGGAAGGTTGTTGTAATCTTCAAGAAATTAGAGGCATTCTACCCAACATTGACAAATTCTCAGCAAAACAGTGTGCTTCCTTGAAAAATTTGGACTTCACACTCCTTGCATGCACTGAAAATTGTTCCTCTTTAAAAGAAATTTGTTTGGAAGGTTGTGAGAATCTTCCAAAAATTAGAGGCATTCCACCTAATTTTGTAGATTTGTGCCTAATGAAGTGCACATCTTTGAAAGATTTAGACTTCACATTCCTTGCATGCACCGAAGAAGGTTGCTTTTTGAAAGACATTTATGTGTATGATTGTGAGAATCTTCGGCAAATTAGAGGTATTCCATCCAACATAAGAGCTCTGTCTGTAAAGGGGTGCACATCCTTGAAAGATTTAGACTTCACAGAATGTTGCTCTTTGAAGAAAATTTATTTGAACAGTTGCGAGAATCTTCTTGAAATTAGAGGTATTCCATCCCAAATAGAAACAATCTCTGCAATAAATTGTACATCCTTGGAAGAATTAGACTTCAGACTTCTCCAAAACAGTAATTATTTTAAGGATCTTATTTTGGAAAATTGCAAGAATCTTCGAGAGATTCGAGAGATTCCACCCAACATAAGAAAATTGTCTGTAATCGATTGCCCATCCTGGACTACCGAGCTTACAACCATGTTTCTAAATGAGAACTACCCTCAATGGGTGCGATCAGTTAAGATCTTTCTTCAAGGAAAAGGGAAGGAAGGTTACATCACAGGAGACTCCAAGAGTCCAAAAAAGGGTGACCCTAACCTCAACAAATGGCAACTGGAAAACAGTTTAGTCATGCCATGGTTGCTCAACACCATGACTAATGAAATTGGGGAAAATTTCATGTACTATGACACTGCCAAGGAGATGTGGGATGCAGTGAAGGAAACCTATTCAAATGTGGACAATACGTCTGCAGTATTTGTGGTCAAGAGCATACTCCATGACCTGCGACAAGACGTTCAATGGAGCTGTACCGAGGATAAGAAGAAGTATAAAGAATTTGTGGAGAAAGATAGGATCTACAAGTTTCTATTGGGGCTGAACACAGAACTTGATGAAATCTGGCGGAGAATCCTTGGAACCAAACCTCTTAAAACAATCCGGGGAGTATTTTCAGAAGTGAGAAGGGAGGAGAGCATGAGGAAAGTGATGCTTGGAAAGTCAAGTGCAGCCCCATCCATTGAAGGCTCAGCAATGGCAGCAAGGGGGAACCAGCCTCGTCCATCTCAAAATAAAAATCGGCCCTGGTGCGATCATTGCAAGAAACTGGGTCACACTAAGGACACCTGCTGGATCATTCATGGCAGGCCTTCAGAGGTGAAACATACCAAAAACTTGGACAGCAGAGGCAACACAGCTGAGGTAAATTCTAACCCATCTCTATTCAGCAAGGAGCAAATGGAAGCACTACAGAAAATTCTCCAGCAAACCATTAGTACAGCTGCAGTAGCACAAAAAGGTAATTTCTTGCATGCTCTAAATACTAGCAAAGGAAAACCAAAATCATGGATCATTGATTCAGGAGCCTCAGATCACATGACTGGAGACTTAACTATGTTTAAAAGTTATTCTCCATGCCTAAACAATTACACAGTTCGAATAGCTAATGGGACTCTTTCTAAGGTCATGGGTAAAGGTTCAATTATTATCTCACAAAATATTACCCTAAATTCAGTCCTTTATGTGTGTAAAAGTGGAGAATAG 4692 0.3755 MAGQASMISSSFSYQWKYDVFLSFRGIDTRRGFTGYLYKALKDKGIHTFIDDEELQRGEKITLSLVKAIEESRIAIPVFSENYASSSFCLDELVVILASIKEKGRMVLPVFYDVDPSDVRHQRGSYMKALANHEERFKDNKEKVNKWREALRQVADLSGYHLKKHGNENEYEFIGKIVKEISNKIIRAPLHAADYPIGLESRVLKVNSLLNFKSDGVHIVGIHGIGGIGKTTLARSVYNSIADQFEGLCFLDNVRENSIKYGLVHLQQTLLSEMVGVKDINLGSVSKGIPIIKDRIHQKKVLLALDDVDKLEQLRAIVGGPDWFDPGSRVIITTRDKHLLTSHGVNETYEVDGLNKKEALELISWNAFITNKVDPSYLDILNRALTYASGLPLALEVIGYHLCGRRMEEWESSLDQYKRIPNKDIQNILKGSFDSLEEDQQKFFLDIACCFKGYALSYVKKILCGHHGFCPEFGIGVLIEKSLIKINVDGHVTLHDLKNLKTLIIRNGCFFKGPELLPNSLRVLEWWRYPSPSLPSNFHPKNLVILELPQGCLMSLELLMSNKKFVNMRVLNFDDCQYITEIPGVSSVPNLEELSFGNCENLTKIHKSVGLLHKLKILNADGCSKLRSFPPIKLTSLEKLRLSYCHSLESFPEILEKMEKVMMLDIMGTPMNKIPISIKKLTRLQKLALRGCGIVELPSSIFKIRELRELIVGACEGLQISEQDEGEAQVSSMVFHNTIDIRLWHCNILDEFFQIGLLVFANVKRLYLHQVNLTILPACIKECRYLTEIYLEGCENLKDIRGIPPNNKKFSVIKCTSLKDLDFKLHACTSEEWFYLKEIYLEGCCNLQEIRGILPNIDKFSATQCASLKNLDFTLLACTEKCSSLKEIYLEGCNNLQEVRGIPLDNENFIGINCASLKSLDFTLLVCTKNCRFLKDIYLYGCENLQEIRGIPPNIKQFSVIKCTSLKDLDFKFHACTSEEWCYLKEIYLEGCCNLQEIRGILPNIDKFSAKQCASLKNLDFTLLACTENCSSLKEICLEGCENLPKIRGIPPNFVDLCLMKCTSLKDLDFTFLACTEEGCFLKDIYVYDCENLRQIRGIPSNIRALSVKGCTSLKDLDFTECCSLKKIYLNSCENLLEIRGIPSQIETISAINCTSLEELDFRLLQNSNYFKDLILENCKNLREIREIPPNIRKLSVIDCPSWTTELTTMFLNENYPQWVRSVKIFLQGKGKEGYITGDSKSPKKGDPNLNKWQLENSLVMPWLLNTMTNEIGENFMYYDTAKEMWDAVKETYSNVDNTSAVFVVKSILHDLRQDVQWSCTEDKKKYKEFVEKDRIYKFLLGLNTELDEIWRRILGTKPLKTIRGVFSEVRREESMRKVMLGKSSAAPSIEGSAMAARGNQPRPSQNKNRPWCDHCKKLGHTKDTCWIIHGRPSEVKHTKNLDSRGNTAEVNSNPSLFSKEQMEALQKILQQTISTAAVAQKGNFLHALNTSKGKPKSWIIDSGASDHMTGDLTMFKSYSPCLNNYTVRIANGTLSKVMGKGSIIISQNITLNSVLYVCKSGE. 1564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03515 1563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 447 IPR027417 -
Seca10g03515 1563 Gene3D - 186 347 IPR027417 -
Seca10g03515 1563 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Seca10g03515 1563 Gene3D - 14 185 IPR035897 -
Seca10g03515 1563 SUPERFAMILY L domain-like 492 847 - -
Seca10g03515 1563 PRINTS Disease resistance protein signature 219 234 - -
Seca10g03515 1563 PRINTS Disease resistance protein signature 295 309 - -
Seca10g03515 1563 PRINTS Disease resistance protein signature 632 648 - -
Seca10g03515 1563 PRINTS Disease resistance protein signature 388 402 - -
Seca10g03515 1563 Gene3D Ribonuclease Inhibitor 1080 1239 IPR032675 -
Seca10g03515 1563 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 721 IPR044974 GO:0006952
Seca10g03515 1563 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 187 - -
Seca10g03515 1563 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 160 IPR035897 -
Seca10g03515 1563 Gene3D - 353 437 IPR042197 -
Seca10g03515 1563 Gene3D Ribonuclease Inhibitor 471 651 IPR032675 -
Seca10g03515 1563 Gene3D Ribonuclease Inhibitor 652 863 IPR032675 -
Seca10g03515 1563 Gene3D Ribonuclease Inhibitor 864 1061 IPR032675 -
Seca10g03515 1563 SUPERFAMILY L domain-like 916 1205 - -
Seca10g03515 1563 SMART till_3 17 157 IPR000157 GO:0007165
Seca10g03515 1563 Pfam BspA type Leucine rich repeat region (6 copies) 1088 1195 IPR026906 -
Seca10g03515 1563 Pfam BspA type Leucine rich repeat region (6 copies) 573 660 IPR026906 -
Seca10g03515 1563 Pfam TIR domain 17 184 IPR000157 GO:0007165
Seca10g03515 1563 Coils Coil 130 150 - -
Seca10g03515 1563 MobiDBLite consensus disorder prediction 1390 1412 - -
Seca10g03515 1563 Pfam NB-ARC domain 213 434 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03515 Seca-Chr10 63773254 63779571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03515 471 876 WRKY Transcription Factor Family AT5G45050 24.883 5.85e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03515 - - gsj:114389198 795.423