Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03507 ATGGAATTTAACAAGGACTTTATGGATGGTTGTTCTACATTTTGGACTGATGAAAATTCTGAGAGCAACCGAGATGAGTCACGTAATGGGGATGGAAACCCGGTGGGAGACCAAGCCGGGCTGTCATGGGGCAGGAGGATGATACATGAACTAACACATGATGACATTAGACGTCTGGAGTTCGGTTCTGAGGGTGAGGCATATAGTTTTTATTCGGATTATGCCAAACAACGAGGGTTTGCTGTGAGGAAAGATGATATTGAGCAAAATGAGAATGGTGATATTGTTAAGCGGTATTTAGTGTGTAATAAGGAGGGAACAAGGGACAAGAAACACTTGGAGAGAAAAGACAGAGTGAGGGAGGCGGGGCCAATTACTCGTGTGCAGTGCACAACAAGGATACGTGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTGCATTCCACGACGATCATAACCATGAGTTAACTCCTCCAACGTATGTTCACATGATTCCAGCTTATAGACGATTGAGTGAATCTGATAAAGCTCAAATTGATACCCTGCATGCAGCCGGTGTGAGAACTTGCCATATTATGAGTTTTATGATTGGACAGAAAGGGGGACATGGTGAATTAGGTTTCTGTAAAAAGGACATGTATAACCACATTGATAAACAGAAGAGGGCTAATATAGAGGACGGTGATGCATTTGCAGCGCTGTGTTATTTGCAGGGAAAGTATAACAATGATCCACTAATGCATTGCATGTTCAGGACAACAGACGATGGCAGACTGCATGACCTATTTTGGTGTGACGGTGCAAGTTGTGTTGATTATCAGTGTTTTGGAGATGTAATAACATTTGACACAACTTATAAGAATAACAAATATAACAAGCCTTTGGTTATTTTTTGCGGGTACAACCACCATGGGGAGACATGTATATTTGGTTGTGCACTTGTTGCTGATGAGAAAACTGAGACTTACAAGTGGGTTCTCGAGACGTTTTTGGAAGCAATGTTTGGCAAAGAGCCCAGTGCTGTAGTTACAGATGGAGATGCAGCCATGCGAGAAGCTATCAGGGTTGTATTCCCAAGTGCAGTTCATAGACTTTGTTCATGGCACATACACTAA 1122 0.4242 MEFNKDFMDGCSTFWTDENSESNRDESRNGDGNPVGDQAGLSWGRRMIHELTHDDIRRLEFGSEGEAYSFYSDYAKQRGFAVRKDDIEQNENGDIVKRYLVCNKEGTRDKKHLERKDRVREAGPITRVQCTTRIRVYLDMRSGKWKVSAFHDDHNHELTPPTYVHMIPAYRRLSESDKAQIDTLHAAGVRTCHIMSFMIGQKGGHGELGFCKKDMYNHIDKQKRANIEDGDAFAALCYLQGKYNNDPLMHCMFRTTDDGRLHDLFWCDGASCVDYQCFGDVITFDTTYKNNKYNKPLVIFCGYNHHGETCIFGCALVADEKTETYKWVLETFLEAMFGKEPSAVVTDGDAAMREAIRVVFPSAVHRLCSWHIH. 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03507 373 Pfam MULE transposase domain 281 372 IPR018289 -
Seca10g03507 373 PANTHER OS01G0519700 PROTEIN 59 372 - -
Seca10g03507 373 MobiDBLite consensus disorder prediction 14 40 - -
Seca10g03507 373 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03507 Seca-Chr10 63411825 63412946 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g03507 MULE 2.6e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03507 - - ccaj:109792835 427.172