Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03502 ATGAAAGCAGGGAAGGGGAACCAGGAAGAGGATGAGTACGAGGAGGAAGGTAAGGATGCTGCAATGACTTCTGTAGGATCTGGCTCAAGTTCAGCATCCAACAATGCTAGCAGATCAGTGTATTCTGATCGCGTTTCAATTTCTCACTTAACCTCTAACCCATCCTTGGGGAATGAAAAGGGAACTCTGAAAACCTTGGAGGCAATACCATGCCCATGTCTGAAGATTCAGCGAACAGGAGGGCAAGGAGCAAATTGTGGTTTTGGAATGAGGGGTCAGAAAACTCGATTTGGACCTGGCATTAGGAAAGGTTTCGAAGGTGGCCAGATTCCAATTTATCGACGAATTCCCAAACTCAAAGGAATTGTAGGAGAAGATGCTAGATTTCAAGACGGGGATGAGGTGTCTCTAGAGACACTGAAGGAGAAAGGTGTGATTAATCCATCAGGAAGACAAAGAAGACTTCCTTTAAAGATTGAGTGGCATGATAGTGCTTCTGTTGGAGCAGCTGCTCTGAGTTCACTTATGATGCATACTGCATTAGCATTATATTACTGCTACTGGAGCACGAATTTAGTATCTGTGCCATTACTACTAGTATTAAAAATAGCTGCGGTGATACCTTTGCATCTTCCCCCAGGTGACACATCAACGGAAAGAACATCAAAAATTGATGGAACCCCTGATCAAATTGAGACAGCAAAACAGTTGGTTAATCAAATCATCAGTGAGTTTGGTGCTAGAGACCTTGTGACCATTCCAAAAGGACTGAAGCCTTTATGA 783 0.4342 MKAGKGNQEEDEYEEEGKDAAMTSVGSGSSSASNNASRSVYSDRVSISHLTSNPSLGNEKGTLKTLEAIPCPCLKIQRTGGQGANCGFGMRGQKTRFGPGIRKGFEGGQIPIYRRIPKLKGIVGEDARFQDGDEVSLETLKEKGVINPSGRQRRLPLKIEWHDSASVGAAALSSLMMHTALALYYCYWSTNLVSVPLLLVLKIAAVIPLHLPPGDTSTERTSKIDGTPDQIETAKQLVNQIISEFGARDLVTIPKGLKPL. 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03502 260 MobiDBLite consensus disorder prediction 1 37 - -
Seca10g03502 260 SUPERFAMILY Ribosomal proteins L15p and L18e 80 146 IPR036227 -
Seca10g03502 260 Gene3D K Homology domain, type 1 200 244 IPR036612 GO:0003723
Seca10g03502 260 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 82 142 IPR021131 -
Seca10g03502 260 PANTHER 50S RIBOSOMAL PROTEIN L15 43 141 IPR005749 GO:0003735|GO:0006412|GO:0015934
Seca10g03502 260 MobiDBLite consensus disorder prediction 23 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03502 Seca-Chr10 63316767 63319958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03502 13 60 Core DNA Replication Machinery Family AT5G08020 64.583 2.26e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03502 K02876 - gmx:100306183 134.806