Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03497 ATGTTGTTGAAACATAGAAGTGAGAAAATGGCGTTCTCTGCACCATTTCCTAGAGGTGGTGGAAATGGTTGGAAAAGCTACAAAAGCTTTGCCTTCCAAGTCCTCACAGGGAGGTGGTTCATGGTGTTTTCATCATTTATGATTATGTCAGTATCAGGAGCAAGCTACATGTTTAGCCTCTACTCGAGAGAAATCAAGTCAACTCTTGGCTATGACCAATCCACTCTCAATCTGTTAAGCTTCTTCATGGACTTGGGTAATAACATAGGCATTCTTTCAGGCCTAATCAACGAGGTCTCTCCACCTTGGGTTGTCTTATCAATTGGTGGGGCATTCAATTTTTTCGGGTATTTAATGATTTGGCTTATTCTGACCCAAAGAATTGCAAAGCCTCAAGTGTGGAACATGTGCTTGTACATCTTTATTGGAGCCAATGCTCATTGTTCTACCAACACTGGTACTGTGGTGACTAGTGTAAAGAACTTCCCTGGCATCAGAGGCATTGTAATGGGCATTTTGGAAGGTTATTTGGGTTTGAGTGCAGCAATCATCACTCAGCTGTACTATGCCTTCTTTAATCACAACTCCAAATCTCTAATTTTGCTCATTGCATTGCTCCCAACAGTTACATCTTTTGTTTTCCTACCATTTATTAGGACCCACAGGGGTATTCAACAGCCAAATGAATCCAAAGCTTTCTATAGGTTCCTCTATTTGACACTTGTCCTTGCAGGGTTTCTCATGATCATAGTCATAGTGCAAAGATGTTTCACCTTTACACAGAGCCAGTATTTTGTCACCACCATTCTGATGCTTCACTTGCTTTTCCTTCCGCTTGTTGTTGTTATCACAGAAGAACGCAAGATTTGGAAGAGCAAACAAGAACACAACAATTGTGAAGATCCTCCAAGGCACATGGACACAGAAACACCTAATCAAGTTGAGTCTACACAGGCTCCCCATGATGAAGAAACTATCAAAAAACGAGTTTCCTTTTGGCAAAACATATTTAAGCCCCCGGACAGGGGTGAAGATTATACAATTCTACAAGCTATTTTTAGCCTTGACATGGTGATAATTTTCTTAGCTAATTTATGTGGACTTGGTAGTGACCAGGCTGTGGTAAATAATTTAAGTCAGATTGGAATGTCTTTAGGATATCCTGCACATACTATAACCACATTTGCCTCTCTCATGTCTATTTGGATCTATCTAGGTAAAATTGCACAAGGGATTGTCTCAGAATTTATCATAGCCAAATATAAAGTCCCTAGGCCACTCATGCTGACATCATGCCTTTTATTATCTTGTGTTGGTAACCTTTTAATTGCCCTCAATGTCCCAAATGCTCTCTACGTAGTCTCAATCATTATTGGCTTTTCATTTGGGGCAAAGTGGCCGTTACTCTTTACCATCATATCTGAACTTTTTGGTCTTAAATATTACTCAACATTGTATAATTTTGGGGCAATAGCAAGCCCAATTGGGTCATACTTGCTCAATGTGAGGGTTGCAGGGTATCTTTATGACAGGGAAGCAACAAGGCAAATGGCAGCATTGGGGCTAAAAAGAAATCCAGGGGAGGAGCTGAACTGCAATGGGGTTGAATGCTATAAATTGGCTTTCATTATAATGACTGCAGTTTGCTTGTTTGGGGCGCTTGTGTCACTCATTTTGGTGCTTAGGACTAGAGAGTTTTACAAAAGTGACCTATACAAGAAATTTAAAGAAGAAGCTAGAATTGTTGAAACTAAAATGTCTCAGAACAGGATTGGACCACCTACAGCAGATGAAGGCTTGATCTTTGGCAAGGAAGTAGTAAAAGAAATTTGA 1833 0.401 MLLKHRSEKMAFSAPFPRGGGNGWKSYKSFAFQVLTGRWFMVFSSFMIMSVSGASYMFSLYSREIKSTLGYDQSTLNLLSFFMDLGNNIGILSGLINEVSPPWVVLSIGGAFNFFGYLMIWLILTQRIAKPQVWNMCLYIFIGANAHCSTNTGTVVTSVKNFPGIRGIVMGILEGYLGLSAAIITQLYYAFFNHNSKSLILLIALLPTVTSFVFLPFIRTHRGIQQPNESKAFYRFLYLTLVLAGFLMIIVIVQRCFTFTQSQYFVTTILMLHLLFLPLVVVITEERKIWKSKQEHNNCEDPPRHMDTETPNQVESTQAPHDEETIKKRVSFWQNIFKPPDRGEDYTILQAIFSLDMVIIFLANLCGLGSDQAVVNNLSQIGMSLGYPAHTITTFASLMSIWIYLGKIAQGIVSEFIIAKYKVPRPLMLTSCLLLSCVGNLLIALNVPNALYVVSIIIGFSFGAKWPLLFTIISELFGLKYYSTLYNFGAIASPIGSYLLNVRVAGYLYDREATRQMAALGLKRNPGEELNCNGVECYKLAFIIMTAVCLFGALVSLILVLRTREFYKSDLYKKFKEEARIVETKMSQNRIGPPTADEGLIFGKEVVKEI. 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03497 610 SUPERFAMILY MFS general substrate transporter 263 565 IPR036259 -
Seca10g03497 610 SUPERFAMILY MFS general substrate transporter 24 222 IPR036259 -
Seca10g03497 610 MobiDBLite consensus disorder prediction 293 320 - -
Seca10g03497 610 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 39 570 - -
Seca10g03497 610 CDD MFS_Mch1p_like 37 553 - -
Seca10g03497 610 Gene3D MFS general substrate transporter like domains 223 578 IPR036259 -
Seca10g03497 610 MobiDBLite consensus disorder prediction 293 308 - -
Seca10g03497 610 Pfam Nodulin-like 38 283 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03497 Seca-Chr10 63143890 63146092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03497 26 578 Nodulin-like Gene Family AT2G39210 59.180 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03497 - - gmx:100789645 827.394