Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03496 ATGTTGTTGAAACATAGAAGTGAGAAAATGGCGTTCTCTGCACCATTTCCTAGAGGTGGTGGAAATGGTTGGAAAAGCTACAAAAGCTTTGCCTTCCAAGTCCTCACAGGGAGGTGGTTCATGGTGTTTTCATCATTTATGATTATGTCAGTATCAGGAGCAAGCTACATGTTTAGCCTCTACTCGAGAGAAATCAAGTCAACTCTTGGCTATGACCAATCCACTCTCAATCTGTTAAGCTTCTTCATGGACTTGGGTAATAACATAGGCATTCTTTCAGGCCTAATCAACGAGGTCTCTCCACCTTGGGTTGTCTTATCAATTGGTGGGGCATTCAATTTTTTCGGGTATTTAATGATTTGGCTTATTCTGACCCAAAGAATTGCAAAGCCTCAAGTGTGGAACATGTGCTTGTACATCTTTATTGGAGCCAATGCTCATTGTTCTACCAACACTGGTACTGTGGTGACTAGTGTAAAGAACTTCCCTGGCATCAGAGGCATTGTAATGGGCATTTTGGAAGGTTATTTGGGTTTGAGTGCAGTAATCGTCACTCAGCTGTACTATGCCTTCTATAGTCACAACTCCAAATCTCTAATTTTGCTCATTGCATTGCTCCCAACAGCTACATCTTTTGTTTTCCTACCTTTTATAAGGACTCATAGGCGTATTCAACAGCCAAATGACTCCAAAGCTTTCTATAGGTTCCTCTATTTGACACTTGTCCTTGCAGGGTTCCTCATGATCATAGTCATAATGCAAAGATGTTTCACCTTCACACAGAGCGAGTATTATGTTACCACCTCTCTGATGCTCCTCTTGCTCATCCTTCCACTTGGTGTTGTTATTATGGAAGAACACAAGATTTGGAACAGAAAACAAGAACACATCAATTGTGAAGATCCTCCAAGGGACATGGATACAGAAAAGCCTAATAAAGTTAAGTCTGCACAGGCTCCACATGATGATCAAATTATCAGAAAACGAGTTTCCTTTTGGCAAAACTTATTCAAGCCCCCGGACAGGGGTGAAGATTATACAATTCTACAAGCCATTTTTAGCCTTGACATGGTGATTCTTTTCTTAGCTACTCTATGTGGATTTGGTAGTGACCAGGCTATGATAAATAATTTAAGTCAGATTGGAATGTCTTTAGGATATCCTGCACATACTATAACCACATTAGCCTCCCTCATGTCCATTTGGATCCTTCTAGGAAACATTGCACAAGGGATTGTCTCAGAATTTATCATAACAAAATATAAAGTCCCTAGGCCACTCATGCTGACATCATGCCTTATATTATCGTGTGTTGGTAACATTTTAATTGCCCTCAATGTCCCAAATGCTCTCTATGTAACCTCATTTGTTATTGGCTTTAGCTTCGGGGCAAAGTGGCCATTACTCTTTTCCATCATATCTGAACTTTTTGGTCTTAAATATTACTCAACATTGTACAATGTTGGGGGAATAGCAAGTCCAATTGGGACATACTTGCTTGGTGTAAGGGTCGCAGGATATCTCTATGATAGGGAAGCAACAAGGCAAATGGCAACATTGGGGCTAAAAAGAAAGCCAGGGGAGGAGTTGAGCTGTAATGGGGCTGAGTGTTATAAATTGGCTTTCATTATAATGACTGCAGTTTGCTTGTTTGGCGCAATTTTATCTCTCATTTCGGTGCTTAGGACTAGAGAGTTTTACAAAAGTGACATATACAAGAAATTTAAAGAAGAAGCTAGAATTGTTGAAACTAACATGGTTGTGCCTCTTAACAGGATTGGAACATCTGTTGCAGATGAAGAATAG 1806 0.4009 MLLKHRSEKMAFSAPFPRGGGNGWKSYKSFAFQVLTGRWFMVFSSFMIMSVSGASYMFSLYSREIKSTLGYDQSTLNLLSFFMDLGNNIGILSGLINEVSPPWVVLSIGGAFNFFGYLMIWLILTQRIAKPQVWNMCLYIFIGANAHCSTNTGTVVTSVKNFPGIRGIVMGILEGYLGLSAVIVTQLYYAFYSHNSKSLILLIALLPTATSFVFLPFIRTHRRIQQPNDSKAFYRFLYLTLVLAGFLMIIVIMQRCFTFTQSEYYVTTSLMLLLLILPLGVVIMEEHKIWNRKQEHINCEDPPRDMDTEKPNKVKSAQAPHDDQIIRKRVSFWQNLFKPPDRGEDYTILQAIFSLDMVILFLATLCGFGSDQAMINNLSQIGMSLGYPAHTITTLASLMSIWILLGNIAQGIVSEFIITKYKVPRPLMLTSCLILSCVGNILIALNVPNALYVTSFVIGFSFGAKWPLLFSIISELFGLKYYSTLYNVGGIASPIGTYLLGVRVAGYLYDREATRQMATLGLKRKPGEELSCNGAECYKLAFIIMTAVCLFGAILSLISVLRTREFYKSDIYKKFKEEARIVETNMVVPLNRIGTSVADEE. 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03496 601 SUPERFAMILY MFS general substrate transporter 269 565 IPR036259 -
Seca10g03496 601 CDD MFS_Mch1p_like 37 553 - -
Seca10g03496 601 Gene3D MFS general substrate transporter like domains 351 569 IPR036259 -
Seca10g03496 601 Pfam Major Facilitator Superfamily 360 564 IPR011701 GO:0022857|GO:0055085
Seca10g03496 601 SUPERFAMILY MFS general substrate transporter 24 223 IPR036259 -
Seca10g03496 601 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 39 572 - -
Seca10g03496 601 Pfam Nodulin-like 38 283 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03496 Seca-Chr10 62934270 62936075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03496 26 578 Nodulin-like Gene Family AT2G39210 57.754 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03496 - - gmx:100789645 814.683