Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03464 ATGGCTCAGTCTCCTTCTGCAAAGACCAAAGACATTGCTTCCTCCCTTCATGTAGAGGAGGCTGCACAACCCCAACCCAGCCCGCTGCGCAAGATGATCGCTGTGGCATCTATCGCCGCCGGCATACAATTTGGGTGGGCCCTACAACTCTCCCTCCTGACCCCATACGTCCAACTGCTGGGCGTCCCACACAAATGGTCTTCCTTCATTTGGCTCTGTGGCCCCATCTCCGGCTTGCTCGTCCAGCCCATCGTCGGCTATTCCAGTGACCGCTGTACCTCCCGCTTTGGCCGCCGTCGCCCTTTCATCTGCGCCGGCGCCGTCGCCGTCGCCATCGCCGTCTTCCTCATCGGCTACGCTGCCGACCTCGGCTATGCCTTCGGCGATGACGTCACCAAGAAAACCCGCCCTCGTGCTGTCACCATTTTCGTCATCGGCTTCTGGATCCTCGACGTTGCCAATAACATGCTCCAGGGACCCTGTCGCGCCTTCCTCGGCGACCTCGCCGCCGGAGACCACCGGAAAACCCGAACCGCCAACGCCTTCTTCTCTTTTTTCATGGGCGTCGGCAACGTCCTTGGCTACGCGGCGGGTTCCATCAACGGCCTCCACCGAGTTTTCCCCTTCACGGAGACAAAGGCCTGTGATGTGTTCTGCGCGAACCTCAAGAGCTGTTTCTTCTTCTCAATCTTGCTCCTTCTCATCCTCTCCACCATCGCGCTTAGTTATGTAAAAGACATGCCGATCACATCGCGTGATGATATTGATGAAGAAAAAGTGGTTTCTTGCTTTGGGGAGTTGTTCGGTGCGTTTAAGGGACTGAAGAGGCCGATGTGGACACTGATGCTGGTGACGGCTCTTAACTGGGTTGCGTGGTTCCCTTTCATCTTATTCGACACTGACTGGATGGGGCGTGAGGTGTATGGTGGAAAGGCAGGGGAGAAGGCTTACGATGCTGGGGTACGCGCTGGTTCCTTGGGGCTCTTGCTCAATGCGGTCGTGCTTGGTGCCATGTCATTGGTGGTGGAGCCTTTGGGGCGTTTCGTTGGTGGAGTTAAGAGGCTCTGGGGGATCGTTAATTTCATTCTCGCCATTTGCATGGCAAGTACAGTACTCATTACTAAGGTGGCTCAGCACGAGCGCCACGTGACTGCCGGTGCCTCCGTTGGCGATCCCTCCGATGGGGTTAAGGCTGGTGCCTTGATTTTCTTTGCCGTCCTCGGAGTCCCTTTTGCGATTACTTTTAGCGTCCCATTTGCTCTTGCATCTATTTACTCCAGCACATCAGGGGCAGGTCAAGGTTTATCTTTGGGAGTCCTCAATATTGCAATTGTCGTTCCACAGATGATAGTATCGGCAATAAGTGGACCGTGGGATGCTTTGTTTGGTGGTGGCAACTTGCCGGCATTCGTGGTGGGTGCTGTGATGGCCGCTGTCAGTGCCATATTGGCAATTGTGTTGCTGCCGACACCGAAGCCGGCCGATATGGCCAGGGCTTCAATCGCAACCACAGGTGGTTTTCATTAA 1527 0.5553 MAQSPSAKTKDIASSLHVEEAAQPQPSPLRKMIAVASIAAGIQFGWALQLSLLTPYVQLLGVPHKWSSFIWLCGPISGLLVQPIVGYSSDRCTSRFGRRRPFICAGAVAVAIAVFLIGYAADLGYAFGDDVTKKTRPRAVTIFVIGFWILDVANNMLQGPCRAFLGDLAAGDHRKTRTANAFFSFFMGVGNVLGYAAGSINGLHRVFPFTETKACDVFCANLKSCFFFSILLLLILSTIALSYVKDMPITSRDDIDEEKVVSCFGELFGAFKGLKRPMWTLMLVTALNWVAWFPFILFDTDWMGREVYGGKAGEKAYDAGVRAGSLGLLLNAVVLGAMSLVVEPLGRFVGGVKRLWGIVNFILAICMASTVLITKVAQHERHVTAGASVGDPSDGVKAGALIFFAVLGVPFAITFSVPFALASIYSSTSGAGQGLSLGVLNIAIVVPQMIVSAISGPWDALFGGGNLPAFVVGAVMAAVSAILAIVLLPTPKPADMARASIATTGGFH. 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03464 508 NCBIfam sucrose/proton symporter 28 492 IPR005989 GO:0005886|GO:0008515|GO:0015770
Seca10g03464 508 PANTHER SUGAR TRANSPORTER 28 487 - -
Seca10g03464 508 Gene3D MFS general substrate transporter like domains 25 488 IPR036259 -
Seca10g03464 508 FunFam Sucrose transport protein 26 488 - -
Seca10g03464 508 SUPERFAMILY MFS general substrate transporter 30 493 IPR036259 -
Seca10g03464 508 CDD MFS_SLC45_SUC 32 485 - -
Seca10g03464 508 MobiDBLite consensus disorder prediction 1 23 - -
Seca10g03464 508 Pfam MFS/sugar transport protein 35 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03464 Seca-Chr10 60986185 60989199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03464 1 508 Sucrose Transporter Gene Family AT1G22710 65.504 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03464 K15378 - gmx:100782007 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03464 10 60986185 60989199 Seca10g03464 10 60986185 60989199 ECH