Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03424 ATGGGTTCGATGGGTAATAACCGTCCTGGCGTGAACTTCTCAACCCAGAGAGATTTTTCAACGAAACTGAAATCTGGTTTGAAAGAAACGTTCTTCCCTGATGATCCATTCAAGCAGTTCAAGGAAGAGGATAATCCTTCACGTAGGGTCATCAAAGGGGTGCAGTACTTCATCCCAATTTTCGAGTGGCTTCCCAATTACTCTTGGCGCATCTTTTGGTCTGACTTAATCGCTGGTCTCACCATCTCTAGCCTCGCCATCCCTCAAGGCATTAGTTATGCCAAACTTGCCAACCTTCCTCCCCTCATTGGCCTTTATTCAAGCTTTGTGCCACCTCTGGTGTATTCTATATTTGGGAGCTCTAGGCACATGGCGGTGGGGACGATAGCAGCAGCATCATTGCTTATAGGTCAAACAATTTCAAGCGTGGCAGACCCAGAAGCAGACCCAACGTTATATCTTCACTTGATTTTCACAACCACCTTTGTCACCGGAGTTTTCCAGGCTTGCTTGGGTTTTTTCAGGCTAGGGATATTGGTGGATTTCTTTTCCCATTCTACCATCACTGGCTTCATGGGAGGGACAGCAATAATTCTCATCCTCCAGCAACTCAAGGGCATATTTGGCATGAAACATTTTTCAACCAAAACCAACCTTGTAGCAGTTGTGAAAGCCATCACCATCAATAGACATGAGATAAGGTGGGAACCCACAGTTCTTGGAGTGATCTTACTTGCTTTCCTGCAATTTACCAGGCACGTGAGGAATAGGAAACCAAAGCTCTTTTGGGTATCAGCTATAGCTCCAATGACGACTGTAATAGTTGCTGGCATTTTCACGTACCTTGTCAAGGGCCAACATCATGGAATACAAATTGTGGGGCATCTAGATAAAGGATTGAATCCTTTGTCCATCCAGTATTTGAACTTCAATGGTAAATACTTATCAGCAGTGATGCGAGCTGGTCTTATCACAGGGGTCTTATCATTGGCGGAAGGAATAGCAATAGGAAGAAGCTTTTCTGTTACTGATAATACACCTCATGATGGGAACAAAGAGATGATAGCTTTTGGCCTTATGAACTTATTTGGTTCTTTTACTTCATGTTACTTGACTAGTGGACCATTTTCCAAGACGGCTGTGAATTACAATGCAGGGTGTAAGACTGCGATGACAAATGTGGTACAGGCAATAGTAATGGCACTCACACTACAATTTTTGGCACCACTATTTGGCTACACCCCTATTGTTGCTCTATCAGCTATTATTATATCTGCCATGGTGGGTCTGATTAATTATCATGAAGTTATCTATCTCTTTAAAGTGGACAAGTTTGATTTTATCATTTGCATGGCTGCTTTACTTGGAGTCACCTTTATAAGCATGGATATTGGCCTCATGATCTCTGTGAGTATTATCAATAGGATTGAATTGAATTTACTTAATTTTGGGAAAACAAATCAAGTCATTAATTTCTGA 1479 0.4206 MGSMGNNRPGVNFSTQRDFSTKLKSGLKETFFPDDPFKQFKEEDNPSRRVIKGVQYFIPIFEWLPNYSWRIFWSDLIAGLTISSLAIPQGISYAKLANLPPLIGLYSSFVPPLVYSIFGSSRHMAVGTIAAASLLIGQTISSVADPEADPTLYLHLIFTTTFVTGVFQACLGFFRLGILVDFFSHSTITGFMGGTAIILILQQLKGIFGMKHFSTKTNLVAVVKAITINRHEIRWEPTVLGVILLAFLQFTRHVRNRKPKLFWVSAIAPMTTVIVAGIFTYLVKGQHHGIQIVGHLDKGLNPLSIQYLNFNGKYLSAVMRAGLITGVLSLAEGIAIGRSFSVTDNTPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKTAMTNVVQAIVMALTLQFLAPLFGYTPIVALSAIIISAMVGLINYHEVIYLFKVDKFDFIICMAALLGVTFISMDIGLMISVSIINRIELNLLNFGKTNQVINF. 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03424 492 PANTHER SULFATE TRANSPORTER 18 471 IPR001902 GO:0016020|GO:0055085
Seca10g03424 492 Pfam Sulfate permease family 72 452 IPR011547 GO:0016020
Seca10g03424 492 NCBIfam sulfate permease 59 472 IPR001902 GO:0016020|GO:0055085
Seca10g03424 492 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03424 Seca-Chr10 54238788 54244478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03424 10 470 Inorganic Solute Cotransporters AT5G19600 64.425 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03424 K17471 - gmx:100789107 752.666