Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03422 ATGCTTGGTCATCTCGTTTCCACTGCAACGAAGGAGCTCCTCAATGGACAGAAAATGGTTCTGGTCCATTGCGAGGAGATTTGCATTTCTGGTGGACGCGTAAGACAGAAGATGAAGTACATAGCGCATGGTCCCATCCACTTCCATGCTCATGCTGTTCGTGGAATGATACCACATAGGACAAAGCGTGGCTCAATCACAAAAATGCTGAAGATGATTTACCCACCTGAGGACGTTAATGCTGGAAAGGAATTAGTTGTTATGGAAATCAATGAAGCAATAGACATGTTCCAGTAA 297 0.4444 MLGHLVSTATKELLNGQKMVLVHCEEICISGGRVRQKMKYIAHGPIHFHAHAVRGMIPHRTKRGSITKMLKMIYPPEDVNAGKELVVMEINEAIDMFQ. 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03422 98 Gene3D Ribosomal protein L13 1 94 IPR036899 GO:0003735|GO:0005840|GO:0006412
Seca10g03422 98 PANTHER RIBOSOMAL PROTEIN L13 1 71 IPR005822 GO:0003735|GO:0005840|GO:0006412
Seca10g03422 98 SUPERFAMILY Ribosomal protein L13 1 80 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03422 Seca-Chr10 53994284 53994580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03422 1 78 Cytoplasmic Ribosomal Protein Gene Family AT4G13170 52.525 3.61e-26 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03422 K02872 - gmx:100813340 94.3597