Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03387 ATGCTCAATGACTCCGCCAGAAACAGAGCATTTCGCGAAGCCATTGAGAAAACCATCACCAAACCTTGCCATGTTCTTGATATCGGTGCTGGAACTGGGTTGCTTTCGATGATGGCTGCGCGAGCTATGGATGGCAAAGGGACGGTAACGGCGTGTGAATCTTATCTTCCGATGGTGAAGTTGATGAAGAAGGTGCTTCGCCTTAATGGGATGGAAGGAAGAATCAAAGTCATCAACAAACGCTCTGATGAACTCAAACTTGGCCTTGATATTCCTTCACATGCAGATGTTCTTCTGGTTGAAAGCAAATTCTTGTGGCAGCTGCATGATTTGCATAACAATGAGGCTGGTGCATCCGATGGCATTCGTCTTACCCCTCCGGGACTTGATAGTGTTTTAAGTGTCAAACGTCAGCAATATGCCATGCATTGTGATCCGATAGGAGAAGAAATAAAACCAAGCATTTTATTTCCTTTCAGTTTACAGAAGCCCTTTATATGCTTTAGGTGGGTACTCCAACTTGATCGTGAAGGGACAATCTATTATTCCACTGCTCCTAGATGGATAAACTCACCAAGTCCAACAATTAAAAGTGAGGGTCCTGTTGATTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCAGGCAGTGGCATTTCCACATTCAAAGGGGAAGAAATTCATTTACATGCTACTCATACTGATACTACTATATCATATAATTTATATTCGCAAGCACCAACGGCTAAGGTTGTACATCATGGGTTGAGGACTGGAGATTTACAGCTTGTACTGCCACTAGAACGGGCTGCAATCTATGGAGACAGAGGATGGAGGCTTTCAATGTTGAAAGCACTAGAAAGTGTGTTGCAGGGGAGAGGTCGCTCATTATGCATGGTTGCAGATGATAGTGTGTTTTTACCTCTTCTTGTGGCACATCTTTCCGAAACACCACACATAATATCATTACTTCCGGGGCTAAAGGAAAGGGGTCTCCAATATTTGCAAGCTGCTGCCCAAGCAAATCGTTTGTCACCTAATCGCATAGAAGTTCTTGAAAAAAGGGTGAAACAGTTAACCATGCTTGATACAAATCAGAAAAAGGTTGATCTGTTAATAGCAGAACCTTTCTATTTTGGACATGATGGCATGCTTCCATGGCAGAACCTGCGATTTTGCCATGACTTACATTTTATGGTTGGTGCGGTGGGGCTGTATATGTGGATTAATGGGACAGACAATTTTCAGGATCTTTGGAAAAGTCGTTGCTGCTTGAGTAAGATAGAAGGTTTTGACCATTCAGTGGTAAATGCCACATTGGGGGCTTGCGGTCATCTACCTGAATTGGAAGAGGGTCCTTGTCTGCCTTTTTCTGTCTGGCAATGTGGAGAATTTGATGTGCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTTTCAAAACAAATATGCCAATGTCAAGGAAAATCCCAGGTTAAATTCACCAAGACTGGGGTTTGTCATGGGTTTGTACTATGGATTGACTGGGTGATGAATTTGCAAAATTCTGTTGTGATATCAACTAGTCCAGATAAGAGATATTGGAAGCAGGGAATAAAGCTTCTTGCAACACCTAAAACAGTAGGACCCCAAAGATCGAGAGATGTCCAAGCATGTTGTTCTGCTGTTCTTGAAGCATTTTTTAATCCGTTAAAGGGGGAACTCAAAATTATACTTGATTTCTTATGA 1731 0.4229 MLNDSARNRAFREAIEKTITKPCHVLDIGAGTGLLSMMAARAMDGKGTVTACESYLPMVKLMKKVLRLNGMEGRIKVINKRSDELKLGLDIPSHADVLLVESKFLWQLHDLHNNEAGASDGIRLTPPGLDSVLSVKRQQYAMHCDPIGEEIKPSILFPFSLQKPFICFRWVLQLDREGTIYYSTAPRWINSPSPTIKSEGPVDWCDHWKQCVWFVPGSGISTFKGEEIHLHATHTDTTISYNLYSQAPTAKVVHHGLRTGDLQLVLPLERAAIYGDRGWRLSMLKALESVLQGRGRSLCMVADDSVFLPLLVAHLSETPHIISLLPGLKERGLQYLQAAAQANRLSPNRIEVLEKRVKQLTMLDTNQKKVDLLIAEPFYFGHDGMLPWQNLRFCHDLHFMVGAVGLYMWINGTDNFQDLWKSRCCLSKIEGFDHSVVNATLGACGHLPELEEGPCLPFSVWQCGEFDVLSETFDVMEFDFSKQICQCQGKSQVKFTKTGVCHGFVLWIDWVMNLQNSVVISTSPDKRYWKQGIKLLATPKTVGPQRSRDVQACCSAVLEAFFNPLKGELKIILDFL. 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03387 576 Gene3D Vaccinia Virus protein VP39 264 404 IPR029063 -
Seca10g03387 576 CDD AdoMet_MTases 25 112 - -
Seca10g03387 576 Gene3D - 415 575 - -
Seca10g03387 576 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 333 544 IPR029063 -
Seca10g03387 576 Gene3D - 164 253 - -
Seca10g03387 576 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 473 544 IPR025799 GO:0016274|GO:0018216
Seca10g03387 576 Gene3D Vaccinia Virus protein VP39 1 125 IPR029063 -
Seca10g03387 576 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 242 IPR029063 -
Seca10g03387 576 FunFam Protein arginine N-methyltransferase 7 262 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03387 Seca-Chr10 52233511 52241071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03387 1 101 C2H2 Transcription Factor Family AT3G12270 34.545 2.33e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03387 K11438 - gmx:100785846 882.478