Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03381 ATGTCTGATGTTCACAATGAATATATACCGAATCATTCTGTTCAGGGACAAAGTTTTGATGACTTTGAGCCGATTCTCTCCGGCAATAAACTTACGCAAAGGTCTCGGGGCTTTCCTGAGAGCCATGTCCTTAGAAGTTTCTCAACAGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTAGTGGTTCGGAAGAGACCGCTAAACAAGAAGGAAATAGCAAAGAAAGAGGAAGATATCATTACTATAGATTCAAATTGTCTCACAGTTCATGAAAGAAAACTCAAGGTTGACTTAACAGAATATGTTGAGAAACATGAGTTTTTTTTTGATGCTGTGCTGAATGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTGGAGCCCATAGTCCCACTGGTTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGCCAAACTGGCAGTGGGAAGACCTATACTATGCAACCATTGCCTCTCAGAGCATCCCAACATATTTTAAGATTAATGCAACATACATACCGGAACCAAGGTTTCCAATTGTTTGTTAGTTTCTTTGAAATATATGGGGGGAAACTATTTGATCTCCTCAATGATCGAAAGAAACTTTGCATGAGGGAGGATGGGAAACAGCAGGTTTGCATTGTTGGCTTGCAAGAATACAGAGTATCTAAAGTTGAGACAATCAAAGAATTTATTGAGAAAGGAAATGCTACGAGAAGTACTGGTACAACTGGTGCAAATGAGGAATCCTCTCGATCACATGCTATACTTCAGCTTTGTATCAAGAGGTCAGCTGATGGGACTGAATCAAAGCCTGCTCGAGTTATAGGCAAACTATCTTTTATTGATCTGGCTGGAAGTGAACGTGGTGCAGATACTACAGATAATGATAAGCAGACTAGGATTGAAGGTGCTGAAATCAATAAAAGCTTACTTGCACTTAAAGAATGCATTAGAGCTTTAGACAATGATCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACTGAAGTTCTACGAGACTCTTTTGTTGGTAACTCACGCACTGTAATGATATCATGCATTTCGCCAAGCTCTGGTTCATGTGAGCATACTCTCAACACATTAAGATATGCTGACAGAGTGAAGAGCCTGTCAAGGGGGAACAGCTCCAGAAGGGATCCCCTTTCTTCTTCAAACCTTAGAGACTCAACTGTATTGCCTGGGTCTTCAGTTATATCTCAAGATGATACCTTTGAGGATGAAATAACATATGTTTCCAGCGAGAGGAATCAATTTGGTTGGTCCAAACAGCTTGAAAGAGAACCCTCTCCTCCAATTAATGTGGACCCTGTTCCAAGTGGCAGGATGGGGGGAAATTTGGCACCATCTTTGTATTCTGACCCACAAAAGGGTCAAAGAGGTAGTCAAAATGACAGGGCTGACACTGAAAATCATTACCTAGGGCCAACATATGAACAAGACAGAACAAGACAATCGAGTAAGAGGGTGGATAACAACCAATCATTTGCTATGGAGAACAAGAGGAAGATAGAATCTCGTGTTAAACATATAGATCTATCACATGTTGAGACTAATCATTTTGATCCTGATGTTGATTTAAATGCCCTGCTGAAGGAAGAGGAAGATCTTGTAACTGCTCACCGGAGACAAGTGGAGGAAACAATAGACATTGTTAGGGAGGAGATGAATTTACTCGTTGAAGCTGACCAACCAGGAAATCAACTGGATGATTATATTTCCAAATTGAATGCCATTTTGTCACAAAAGGCTGCAGGAATCTTTCAATTGCAGACGCAGTTGGCTCAATTTCAGAGACGTTTAAATGAGTATAATGTTTTCGTTTCTTCAGGTAACTGA 1872 0.4017 MSDVHNEYIPNHSVQGQSFDDFEPILSGNKLTQRSRGFPESHVLRSFSTDKERANNVAKIKVVVRKRPLNKKEIAKKEEDIITIDSNCLTVHERKLKVDLTEYVEKHEFFFDAVLNEDVSNDEVYAETVEPIVPLVFQRTKATCFAYGQTGSGKTYTMQPLPLRASQHILRLMQHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSKVETIKEFIEKGNATRSTGTTGANEESSRSHAILQLCIKRSADGTESKPARVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSRGNSSRRDPLSSSNLRDSTVLPGSSVISQDDTFEDEITYVSSERNQFGWSKQLEREPSPPINVDPVPSGRMGGNLAPSLYSDPQKGQRGSQNDRADTENHYLGPTYEQDRTRQSSKRVDNNQSFAMENKRKIESRVKHIDLSHVETNHFDPDVDLNALLKEEEDLVTAHRRQVEETIDIVREEMNLLVEADQPGNQLDDYISKLNAILSQKAAGIFQLQTQLAQFQRRLNEYNVFVSSGN. 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03381 623 FunFam Kinesin-like protein 41 385 - -
Seca10g03381 623 ProSitePatterns Kinesin motor domain signature. 281 292 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca10g03381 623 PANTHER KINESIN-RELATED PROTEIN 6 11 617 IPR027640 GO:0003777|GO:0007018
Seca10g03381 623 MobiDBLite consensus disorder prediction 431 508 - -
Seca10g03381 623 Coils Coil 553 573 - -
Seca10g03381 623 MobiDBLite consensus disorder prediction 381 410 - -
Seca10g03381 623 Gene3D Kinesin motor domain 40 384 IPR036961 -
Seca10g03381 623 ProSiteProfiles Kinesin motor domain profile. 59 382 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g03381 623 Pfam Kinesin motor domain 65 381 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g03381 623 MobiDBLite consensus disorder prediction 386 410 - -
Seca10g03381 623 PRINTS Kinesin heavy chain signature 282 300 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g03381 623 PRINTS Kinesin heavy chain signature 332 353 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g03381 623 PRINTS Kinesin heavy chain signature 139 160 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g03381 623 PRINTS Kinesin heavy chain signature 248 265 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g03381 623 CDD KISc_KIF2_like 59 380 - -
Seca10g03381 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 382 IPR027417 -
Seca10g03381 623 SMART kinesin_4 57 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03381 Seca-Chr10 52038597 52046120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03381 26 382 Calmodulin-binding Proteins AT5G65930 33.423 9.40e-46 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03381 K10393 - gmx:100783382 1079.32