Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03368 ATGAACCCAGAAGGGAGTGAGTGTGAGGTTGGGTTGGACAAGAGTTTTGGGTTCTCAAAGCTCTTCATTGCTCATTATGAGCTTGGACAAGAAGTGGGGCGTGGCCATTTTGGATACACTTGCTCTGGAAAGGGAAAGAAAGGCAGTTTCAAGGGCCATGATGTTGCTGTCAAACTCATTCCAAAATCCAAGATGACAACAACAATTGCTATAGAGGATGTAAGGAGTGAAGTAAAGATATTGCGAGCTCTAACTGGGCATAGGAATTTAGTGCAGTTCTATGAAGCCTATGAAGATGATGACAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGCAAACTGCTAGATAAGATTCTTTCCAGGGGTGGCAAGTACTCAGAAGAGGATGCCAGAGTTGTTTTGATTCAGATATTAAGTGTGGTAGCTTACTGTCATCTGCAGGGTGTTGTTCACCGTGATCTCAAGCCCGAGAAGATAAAAGGTTGTATCAAGGAGTAA 501 0.4251 MNPEGSECEVGLDKSFGFSKLFIAHYELGQEVGRGHFGYTCSGKGKKGSFKGHDVAVKLIPKSKMTTTIAIEDVRSEVKILRALTGHRNLVQFYEAYEDDDNVYIVMELCKGGKLLDKILSRGGKYSEEDARVVLIQILSVVAYCHLQGVVHRDLKPEKIKGCIKE. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03368 166 PANTHER SERINE/THREONINE-PROTEIN KINASE 15 160 - -
Seca10g03368 166 ProSitePatterns Protein kinases ATP-binding region signature. 32 58 IPR017441 GO:0005524
Seca10g03368 166 ProSiteProfiles Protein kinase domain profile. 26 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03368 166 SUPERFAMILY Protein kinase-like (PK-like) 16 159 IPR011009 -
Seca10g03368 166 FunFam CDPK-related kinase 1 19 114 - -
Seca10g03368 166 Pfam Protein kinase domain 26 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03368 166 Gene3D Transferase(Phosphotransferase) domain 1 19 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03368 Seca-Chr10 51241605 51244517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03368 3 166 EF-hand Containing Proteins AT3G50530 75.449 3.25e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca10g03368 Pkinase 3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03368 - - gmx:100803625 280.026