Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03360 ATGCTGTTTTCGGCCTTTGGCCCGATTTTTAAAATTTTAAGTGGATTACGTGTTCATTCAACTAAGCCCAAGAGAGTTGTTTTGGAATGTTGCAATGAAGGTCAACATAGAGTGAAAAACTTTGGAAATGAAAAAACTCAAGATCACATGGTTCAAACTAAAAGAAAGTGTTCAACTACTCGAAGTGGTTGTCAAGCTTCACTTATTGTTTCAAGATCAAGAGGCACAATAGAAAGCAATTGGATTATACAATTTTTTAACAATGATCATAACTATGTCATGGTTAGCCCTCGAAGTGTGTCTTATATGAGGTGTCATAAGAAGATGACTATTGCCGCAGAAAGCCTGTTGAAAAATTTGAGGAAGAAGGCTTGCCAACCGGGAAAGGTTGCTAACATTTTCAATGACGATGACTTGGCTTTCTCTAACAGAGATTGTTGGAATAGTATCATAAATTTACATAGAAAGAATTTAGATGTCAGAGATGCACAAGCCGTATCAAGAGTAGCTTACCAACAATTTGGAGATGCTATAACTTTTAACACCACATACAAAACAAACAAGTATAGTATGATGTCTGCCCCATTTACTGGACTGAATAATCATTATCAGTCAAATTTATTTGGTTGTGCTCTGTTACAAGATGATTCAGAGAGTTCTTTTATATGGTGGTTTGAAACGTGGCTTGAGGCAATGGATGGGGAAAAGCCTATATCTATCATAACTGATCAGGATCTAGCTCCTGGAGTTGCTTTGGCTAAAGTATTTCCAGAAACTCCACATTGTCTTTGCTTATGGCACATTAGAAAGAAGTTTCTTGAAAAGTTAGCTCACATATATCTTAAAAAGTCTATATTCAAGCGTGAGCTTAAAATATGCATTCGATATTCACCTAGTAACCAAAAATTTGAGGAAGAATGGAAGTGGTTAATGATTGAGTATAACTTGGAGGATAATGAATGGCTTCAATGGCTATATAAGATTAGAGACTTATGGGTGCCAATTTATAATAGAAGTACATTCTTTGTTGGGATGAATGCTACTCAAAGAAGCGAGAGTATTAATGCATTTTTTATTCTTTTATAG 1086 0.3527 MLFSAFGPIFKILSGLRVHSTKPKRVVLECCNEGQHRVKNFGNEKTQDHMVQTKRKCSTTRSGCQASLIVSRSRGTIESNWIIQFFNNDHNYVMVSPRSVSYMRCHKKMTIAAESLLKNLRKKACQPGKVANIFNDDDLAFSNRDCWNSIINLHRKNLDVRDAQAVSRVAYQQFGDAITFNTTYKTNKYSMMSAPFTGLNNHYQSNLFGCALLQDDSESSFIWWFETWLEAMDGEKPISIITDQDLAPGVALAKVFPETPHCLCLWHIRKKFLEKLAHIYLKKSIFKRELKICIRYSPSNQKFEEEWKWLMIEYNLEDNEWLQWLYKIRDLWVPIYNRSTFFVGMNATQRSESINAFFILL. 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03360 361 Pfam MULE transposase domain 178 271 IPR018289 -
Seca10g03360 361 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 358 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03360 Seca-Chr10 51144505 51145694 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g03360 MULE 3.6e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03360 - - mtr:112420114 470.314