Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03345 ATGTTTGAAGATATTGTTGGAAGTGCATACTATGTTGCACCGGAAGTGTTAAAACGAAAGTCAAGCCCTGAATCAGATGATGCTAATCACAAAAGAATTGACTACAAGGACTTTTGTGATGTGTCAACAGTGAAAAACATGTCTGATGCTGCACTCATTGGCACAGTGGCAATTCCAGTGGAACAAATATACTCAGGGGAAAGAGTACAAGGGACCTACCCTATCCTGAATAACAATAGGAAGCCTTGTAAGAAAGGTGTTGTCTTGAGTTGGAGCATTTATTTTGCTCATGGAAAGTGTTGGCATGATATCATTTGCTCATGGAAAGGAAGCCTTGTAAGTAAGTTGCTTGAGATCATTGATGTGAGTGAGCTGCCAGAATTTCTAGGAGGTAGCTGCATTTGTGTAGATCAGGGTGGTTGTATGAGGTCTGATAAAGGGCCATGGCAACTGGCAAGACCCAAACATTTTAAAGGTTTTCTACTTATTATGACAGTTGTGGGCATGCAGATGGTTCTTGGTGGTAAAGTACAATATTTTAAACAAATAATATTAGTTTCTAATGATGAGGAGAGGGTAACTGAAAGTGATAAGAGATATTATCCCATGGTACAATTTCCAATACCATCTTAG 633 0.3918 MFEDIVGSAYYVAPEVLKRKSSPESDDANHKRIDYKDFCDVSTVKNMSDAALIGTVAIPVEQIYSGERVQGTYPILNNNRKPCKKGVVLSWSIYFAHGKCWHDIICSWKGSLVSKLLEIIDVSELPEFLGGSCICVDQGGCMRSDKGPWQLARPKHFKGFLLIMTVVGMQMVLGGKVQYFKQIILVSNDEERVTESDKRYYPMVQFPIPS. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03345 210 Gene3D - 102 157 IPR036865 -
Seca10g03345 210 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 112 154 - -
Seca10g03345 210 SUPERFAMILY CRAL/TRIO domain 108 159 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03345 Seca-Chr10 50671580 50673381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03345 50 96 Phospholipase D Gene Family (Wang group) AT2G42010 63.830 4.91e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03345 K26544 - gmx:100792695 103.605