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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca10g03342
ATGCATTCTGAGGCAAGGATACTTATGGAGCCTGGATTTGATGATACTACAGAGGAGAACCCACCACCATATGAGCTTGATGCTTTGAATCGTGAAAGTTCACTTCAGCATCCTGATCCTGATGCTATTCCCTTGTCTTCAGAGAACTTGAACCAAACTGGATTTGGAAATCAAGAGGAGGGAACGGTGAGTCATGAGGAATATTTTAGAGTTTTAGATGAGATGAAAACTAAGAGCTACTCATATGACACTGATAAGGATACAAACATCCATGATGGTAATACCTCATGCCTTGCAACATGCACAACAAGTGACATAGATGATGATCTTTGGAAGGGTTCTTTCACATATGAAGCTGAGGATGAGGAGGGAAGGAATGAACTTGGTTGTCTCACATCATGTGTTGGAACTAGATGGTATAGAGCTCCTGAACTACTTTATGGATCTACAAACTATGGTTTAGAGGTTGATCTCTGGTCCTTAGGATGTGTCTTTGTTGAGCTCTTAACACTGAAGCCTTTGTTTACTGGAACAGCTGATATAGATCAACTCAGTAGAATTATCAGTGTTTTAGGTAACCTCAATGAGGAAGCTTGGTCTAGTTGTTCCAAACTTCCTGATTATGCAACAATCTCATTCAGTAAGGTGGAAAATCCTATTGGTCTTGAAGCCTGCATGCCCAACCACTCCCTTGATGAAGTTTCCTTTGTAAAAAGATTGGTTTGTTATGATCCAGCTAGGAGAGCCACAGCAATGGAGTTACTTCATGACAAGTACTTCAGTGAAGAACCCCTTCCTGTTCCTGTTTATGAGCTGAGGGTTCCTTTGACTAGAAATGGACAAGACCAGGATTCCCCTGGTGGGTTTCATGGTTTCAATGAAAGGGGTTCTGATTCTGATTGA
903
0.4142
MHSEARILMEPGFDDTTEENPPPYELDALNRESSLQHPDPDAIPLSSENLNQTGFGNQEEGTVSHEEYFRVLDEMKTKSYSYDTDKDTNIHDGNTSCLATCTTSDIDDDLWKGSFTYEAEDEEGRNELGCLTSCVGTRWYRAPELLYGSTNYGLEVDLWSLGCVFVELLTLKPLFTGTADIDQLSRIISVLGNLNEEAWSSCSKLPDYATISFSKVENPIGLEACMPNHSLDEVSFVKRLVCYDPARRATAMELLHDKYFSEEPLPVPVYELRVPLTRNGQDQDSPGGFHGFNERGSDSD.
301
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca10g03342
300
MobiDBLite
consensus disorder prediction
45
60
-
-
Seca10g03342
300
ProSiteProfiles
Protein kinase domain profile.
1
260
IPR000719
GO:0004672|GO:0005524|GO:0006468
Seca10g03342
300
MobiDBLite
consensus disorder prediction
277
300
-
-
Seca10g03342
300
SUPERFAMILY
Protein kinase-like (PK-like)
127
266
IPR011009
-
Seca10g03342
300
PANTHER
CELL DIVISION PROTEIN KINASE
100
266
-
-
Seca10g03342
300
Gene3D
Transferase(Phosphotransferase) domain 1
98
266
-
-
Seca10g03342
300
SMART
serkin_6
24
260
IPR000719
GO:0004672|GO:0005524|GO:0006468
Seca10g03342
300
MobiDBLite
consensus disorder prediction
1
62
-
-
Seca10g03342
300
Pfam
Protein kinase domain
131
260
IPR000719
GO:0004672|GO:0005524|GO:0006468
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca10g03342
Seca-Chr10
50622217
50624354
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca10g03342
4
300
Core Cell Cycle Gene Families
AT4G28980
57.718
1.51e-113
335
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
PK
CMGC_CDK-CCRK
Seca10g03342
Pkinase
2.9e-22
CL0016
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca10g03342
-
-
gmx:548056
464.151
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