Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03336 ATGGGTTCTTTCTTGTGCACCCGAAATGCCACACAATGGAGAGCTACATTGGATGGATTGCAGAATAATCCTGACAAAAAAATTATGAAGGTGCTTCAGATAAGTTTTGACGAGAAATCACTCATAACCATTAGAAACCAAGAAATTCATATGCATAAAATATTGCAAGAATTGGGGAAACAAATCGTTCGAGGAGAACATCTCGACGAGCCAGGATGCTGGAGTAGGTTGTGGCTTTACCATGATTTCCATCATGTGATGATGACCCAAAAGGTAGAAACACACGATGTTAAAGCTGTAGTTCTAAATCAAAAGGTGGATGATGACTTCAAATTCCATAAGTTAAGGGCTGAAGATTTGTCAAAAATGAGAAGCCTCAGACTACTCATATTATATCATAAAAATATTTTAGGAAGCCCTATATTTCTTTCTAATTGCCTCTGTTATCTTTCATGGAATGGTTATCCTTTCACTTCCTTGCCATCAAATTTTCAAGCATATAACCTTGTTGAGTTGAATATGCCATACAGTAGCATCAAACAACTATGGAAAGGCATCAAGAATCTACCTAATTTGAAGAGGATGGATCTGAGCAATTCTAAAAATCTCAAGGAGACTCCAAGTTTTGAAAGGATCCAAAATCTTGAGCGGTTAGATCTTACAGGATGCATAAACCTATTGTGGGTACATCCATCAATTGGACTTCTTAAAAATCTTCTATTCTTAAGTTTGCAAAATTGTAACAGTTTGGTCAAACTCGATTTTGGCAGGGTAACAAATTTAACTTCTCTGAAAGTTCTATGGCTCTCTGGTTGCACAAAACTTGAAAAAACACCAGACTTTACAGGGGTATCAAATCTTGAGTATCTTGAAATGGATCGATGTACAAGTTTATTCACTATTCATGAATCTATCTGGGCTCTAGAAAATCTTAAATTCTTGAGTTTGAGTTTGAGAGACTGCACAAATCTTACATTCTTGAGTTTGAAAGGCAATCTTATAACTTTGTGTTCACCCAAATGCTCAAGTTTTATGAATCTGCCCCAGGAATCAACTTTCAATTCTTCTTCCCCTTTGAAATCTTTGATTTTTTTGGATGTAAGCTTTTGA 1110 0.3586 MGSFLCTRNATQWRATLDGLQNNPDKKIMKVLQISFDEKSLITIRNQEIHMHKILQELGKQIVRGEHLDEPGCWSRLWLYHDFHHVMMTQKVETHDVKAVVLNQKVDDDFKFHKLRAEDLSKMRSLRLLILYHKNILGSPIFLSNCLCYLSWNGYPFTSLPSNFQAYNLVELNMPYSSIKQLWKGIKNLPNLKRMDLSNSKNLKETPSFERIQNLERLDLTGCINLLWVHPSIGLLKNLLFLSLQNCNSLVKLDFGRVTNLTSLKVLWLSGCTKLEKTPDFTGVSNLEYLEMDRCTSLFTIHESIWALENLKFLSLSLRDCTNLTFLSLKGNLITLCSPKCSSFMNLPQESTFNSSSPLKSLIFLDVSF. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03336 369 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 260 348 IPR044974 GO:0006952
Seca10g03336 369 SUPERFAMILY L domain-like 65 338 - -
Seca10g03336 369 Pfam Leucine Rich Repeat 168 187 IPR011713 -
Seca10g03336 369 Gene3D Ribonuclease Inhibitor 6 369 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03336 Seca-Chr10 50517277 50526306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03336 38 368 WRKY Transcription Factor Family AT4G12020 36.723 4.42e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03336 - - tpra:123891889 432.95