Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03335 ATCCAACACTCATCATCAAGCGATTCATTCATCCTCTCTGAACCGTTCTTCAAGCTGGTGGCTGTGCAGCGAATTTTCATAGTGAGGAGGGTTCCCCTCTACGGAATTCAGAGAACATGGACTCAAAGTCAAAACATTGATCAGGTATATTACTCTCTGAGGCTAGAGTTTGAAGAGATTGAAAATATTGTAGGTAAAGTAATAAAAACATTAGATCATAAATTCTCAGGGTTTGCATGTGATCTAATTGGGATACAACCCCGTGTAGAAGAATTGGAAAAGCTTCTAAATATGAGCTCTGGAAATGATCATGTTCGAGTTTTAGGAATTTGGGGTATGGGTGGAATAGGAAAGACAACTCTTGGAAATGTCTTGTATGACAGAATCTCATATCAGTTTGATGCATGTTGCTTTATAGAGGACACAAGCAAAATTTATAGAGATGGTAGTGCCATTGCTATACAAAAGCAAATTCTTCTTCAAAGTCTAGATGAAAAAAGTTTAGAGACATATAGTCCTTCAGAAATATCCGGAATTATAAGTAATAGGTTACAGAACATAAAAGTCCTTTAG 573 0.3665 IQHSSSSDSFILSEPFFKLVAVQRIFIVRRVPLYGIQRTWTQSQNIDQVYYSLRLEFEEIENIVGKVIKTLDHKFSGFACDLIGIQPRVEELEKLLNMSSGNDHVRVLGIWGMGGIGKTTLGNVLYDRISYQFDACCFIEDTSKIYRDGSAIAIQKQILLQSLDEKSLETYSPSEISGIISNRLQNIKVL. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03335 190 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 190 IPR044974 GO:0006952
Seca10g03335 190 Pfam NB-ARC domain 91 161 IPR002182 GO:0043531
Seca10g03335 190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 189 IPR027417 -
Seca10g03335 190 Gene3D - 77 190 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03335 Seca-Chr10 50515118 50517272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03335 83 190 WRKY Transcription Factor Family AT5G45050 37.037 4.38e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03335 - - gmx:100807905 198.364