Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03234 ATGGTATTGCTAGTTGCACTCGCATTGCTTCTGGGTCTCTTCCTGGCTGTTCTTCTTTTGAACCCTCGAAACCGCAAATCTGGGCATAAGGGAAAAGCCCAGTCCAGCTTCAACAATAAGGCATCAAAACCCTACAGCAAGAATGAAGTCTCATTGCATAACAAAAGAACAGATTGCTGGATAATCATCAAGAACAAGGTATATGATGTTACCTCATATGTGGAGGAACATCCAGGTGGTGATGCTATTCTAGCACATGCTGGAGATGATTCAACTGAAGGGTTTTTTGGGCCACAGCATGCAACTCGAGTCTTTGACATGATTGATGACTTCTACATTGGAGACTTGGAGCAATAG 357 0.4342 MVLLVALALLLGLFLAVLLLNPRNRKSGHKGKAQSSFNNKASKPYSKNEVSLHNKRTDCWIIIKNKVYDVTSYVEEHPGGDAILAHAGDDSTEGFFGPQHATRVFDMIDDFYIGDLEQ. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03234 118 Pfam Cytochrome b5-like Heme/Steroid binding domain 47 116 IPR001199 -
Seca10g03234 118 SMART Cyt_b5_2 45 117 IPR001199 -
Seca10g03234 118 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 42 117 IPR001199 -
Seca10g03234 118 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 73 80 IPR018506 GO:0020037
Seca10g03234 118 FunFam Sulfite oxidase, mitochondrial 40 118 - -
Seca10g03234 118 MobiDBLite consensus disorder prediction 25 49 - -
Seca10g03234 118 PANTHER CYTOCHROME B5 29 116 - -
Seca10g03234 118 MobiDBLite consensus disorder prediction 31 48 - -
Seca10g03234 118 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 40 117 IPR036400 -
Seca10g03234 118 Gene3D - 35 118 IPR036400 -
Seca10g03234 118 PRINTS Cytochrome B5 signature 104 116 IPR001199 -
Seca10g03234 118 PRINTS Cytochrome B5 signature 67 77 IPR001199 -
Seca10g03234 118 PRINTS Cytochrome B5 signature 77 91 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03234 Seca-Chr10 47316345 47321903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03234 3 116 NADPH P450 reductases AT1G60660 61.667 6.43e-50 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03234 - - gmx:100527821 202.601