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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca10g03215
ATGTCAAACTTGTGTTACATTTTCTGCATGTTAGCAGTTCTTCTTCTTCTGCAAAATCCCACTAGAATACACTGCCATACTAAGGGAATTAGACCAAGACGTTCTGCTGGGAATGGTTTATTGACCAATATGTCAAGAGTAGAGTATTCAGAACAGCAATTCATGAAATGGGTCAATTTTGTTGGTAGCCTTAAACACACAGTTTTTAAGACTGCAAAAAATAAGCTCTTTGCTTCTTACACTTTGCACGTTGATAAGAATCCTGCTCTTGGTGATTTCACATCAATTCAAGAAGCCATTGATTCCCTTCCATCCATTAATCTTGTGAGAGTGATCATCAAGGTCCATGCAGGGGTTTACACGGAGAAAGTTAATATTCCAGCTTTGAAATCCTTCATAACAATAGAAGGAGCTGGTGCAGATAAAACCATTGTTCAATGGAATGACACTGCTCAAACACCTGGGCCAAGTGGGAGACCATTGGGAACCATTGGTTCAGCAACTTTTGCAGTGAATTCACTTTATTTCATTGCCAAGAACATAACATTTCAAAACACTACTCCTGTTCCTGCACCAGGAGCAATTGGAAAACAAGCAGTTGCATTCAGGATTTCAGCAGACACAGCAGCATTCTTGGGCTGCAAATTCTTAGGAGCACAGGACACACTGTATGATCATTTGGGCAGGCATTACTATAAGGATTGTTATATTGAAGGTTCTGTTGATTTCATATTTGGCAATGCTCTCTCCCTTTATGAGGGATGTCACGTGCATGCCATAGCACAGAATACAGGGGCCTTAACAGCTCAAGGAAGAAGCAGTATGTTGGAAGACACAGGGTTCTCATTTGTGAACTGTAAGGTCACGGGGTCAGGGGCACTATACCTTGGAAGGGCTTGGGGTCCTTTTTCTCGCGTGGTCTTCGCCTATACCTATATGGACAACATCATCATTCCCAAAGGATGGTATAACTGGGGTGACCCTAACCGTGAAATGACTGTATTCTATGGACAGTACAAATGCACAGGACCAGGAGCAAGCTTTGCAGGGAGAGTAGCATGGTCAAGAGAACTCACTGATGAGGAAGCTAGACCTTTTCTTTCACTTAGCTTTATTGATGGGACTGAATGGATCAAAATTTAG
1143
0.4208
MSNLCYIFCMLAVLLLLQNPTRIHCHTKGIRPRRSAGNGLLTNMSRVEYSEQQFMKWVNFVGSLKHTVFKTAKNKLFASYTLHVDKNPALGDFTSIQEAIDSLPSINLVRVIIKVHAGVYTEKVNIPALKSFITIEGAGADKTIVQWNDTAQTPGPSGRPLGTIGSATFAVNSLYFIAKNITFQNTTPVPAPGAIGKQAVAFRISADTAAFLGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIAQNTGALTAQGRSSMLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVAWSRELTDEEARPFLSLSFIDGTEWIKI.
381
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca10g03215
380
Pfam
Pectinesterase
91
374
IPR000070
GO:0030599|GO:0042545
Seca10g03215
380
PANTHER
ACYL-COA THIOESTER HYDROLASE YBHC-RELATED
73
379
-
-
Seca10g03215
380
ProSitePatterns
Pectinesterase signature 2.
237
246
IPR033131
-
Seca10g03215
380
Gene3D
-
77
380
IPR012334
-
Seca10g03215
380
SUPERFAMILY
Pectin lyase-like
78
379
IPR011050
-
Seca10g03215
380
FunFam
Pectinesterase
78
380
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca10g03215
Seca-Chr10
46878714
46882126
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca10g03215
93
378
Carbohydrate Esterase
AT5G47500
50.871
2.70e-103
307
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca10g03215
K01051
-
gmx:100793314
702.975
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