Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03170 ATGGATGGTTTTATGTCTAGCTCATGGAACTCTACTATTAATGACAGTTTTGTTGAGGGATCACAAAGAACCGTTTTAGCAAATGAGGAAACTGCTAACACTGGTGAAGGGACCGATCCTTTATATGAAGATGAAGGTGATGAGTCAAATGTAGTGTCTAGTGATGAGGAACATGCAAATATTTACAAAATTGATGATAAATCTGATATCAAGAAAGTTGACTTTATTGGTTTAACTGAAGATGTCATGAAGATGTATCATTTTCGTACTCATCTTGTGGCATTCAATTTCTACAATACTTATGCTGAAAAGAAAGGATTCGTAGCTAGAAGGTCCATTACGGTTTTAAACAAGAGACGTGAGGTCACTCAACAAACATTTGTCTGCTTCAAGCAAGGATATCATGAGAAGAAACATTTGTAG 423 0.357 MDGFMSSSWNSTINDSFVEGSQRTVLANEETANTGEGTDPLYEDEGDESNVVSSDEEHANIYKIDDKSDIKKVDFIGLTEDVMKMYHFRTHLVAFNFYNTYAEKKGFVARRSITVLNKRREVTQQTFVCFKQGYHEKKHL. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03170 140 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 139 - -
Seca10g03170 140 MobiDBLite consensus disorder prediction 25 55 - -
Seca10g03170 140 Pfam FAR1 DNA-binding domain 96 138 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03170 Seca-Chr10 45884823 45887613 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g03170 FAR1 5.4e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03170 - K17604 aip:107639801 72.7886