Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03162 ATGGAAAACATTAAAGATCCATCAGTTTACAAAAATCCAGTCATTTTGCAGAGTGAGGACTTAATGAAGTATATACTGGAGACTGCTGTTTACCCTCGAGAACCAGAGCCTCTCAAAGAACTGAGAGATGCCACTGAGAATCACCCTTGGGGTTTCATAGCTACTTTACCTGATGCGGGTCAACTACTCACCATACTTTTGAAGCTGTTGAATCCCAAAAAGACAATTGAAGTGGGAGTGTTTACTGGGTACTCACTTCTCCTAACTGCACTCAACATCCCTGATGATGGAAAGATTACAGCCATAGATATTGACAGGAAAGCTTATGAGGTTGGATTACCAGTCATCAAAAAAGCTGGAGTAGAACACAAGATTAACTTCATAGAGTCTCCAGCTCTACCAATTTTGGATAAACTGCTAGAAGATCCTGCAAATGAAGGAACTTTTGACTTTGCCTACATTGATGCTGACAAAGAGAACTATGTGAACTACCATGAGAGGCTTATAAAACTGGTCAAGGTTGGTGGGTTACTTATATATGACAACACATTGTGGGGTGGACGTGTTGCTTGGCCTGAAGACAAAGTTCCACCACACAGCAAACCAGGGAGGGATGCAGCGATTGAATTTAACAAAACAATCACAGAAGATTCTCGTGTTGAATTTTCTCTTACTTCTGTAGGGGATGGGCTCAGTATTTGCAGGCGCATTGCCTGA 717 0.4184 MENIKDPSVYKNPVILQSEDLMKYILETAVYPREPEPLKELRDATENHPWGFIATLPDAGQLLTILLKLLNPKKTIEVGVFTGYSLLLTALNIPDDGKITAIDIDRKAYEVGLPVIKKAGVEHKINFIESPALPILDKLLEDPANEGTFDFAYIDADKENYVNYHERLIKLVKVGGLLIYDNTLWGGRVAWPEDKVPPHSKPGRDAAIEFNKTITEDSRVEFSLTSVGDGLSICRRIA. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03162 238 CDD AdoMet_MTases 76 180 - -
Seca10g03162 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Seca10g03162 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Seca10g03162 238 Gene3D Vaccinia Virus protein VP39 7 238 IPR029063 -
Seca10g03162 238 Pfam O-methyltransferase 28 237 IPR002935 GO:0008171
Seca10g03162 238 PANTHER O-METHYLTRANSFERASE-RELATED 11 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03162 Seca-Chr10 45766389 45768527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03162 15 237 Monolignol Biosynthesis Gene Families AT4G26220 63.229 2.07e-105 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03162 K00588 - gmx:100800911 442.195