Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03155 ATGGGTCGGCGAAAGAACAAGAATCAGAGCAACGAGGACGCTAACAACACGAACATGAGCCACCTTCGATTCCAGGATGCTGACGAGGTCATCGAGGATGTCGCTGAGACCTCCAACATCGACCAATCCATGTGTTTCGACCATGACGATTCTGATGACAAAACCAGCGCCGATTACTACTTCGATTCCTACTCTCATTTTGGTAACTTCTCTTCCAATAGTTCACTTGCTTTAGTTTTGAGCTTTTTCATCTGGGAATTCACGAACTTGTCTAAACAATCAAGGAGTGATAAAGAGAAACAAGAAATGTTGAAGGACACAGTAAGAACTAAGACATATCAAAATGTTATTTATCAGAATAGGTTTTTATTCAAGAATAAAATAGTTCTTGATGTGGGTGCTGGGACTGGGATTTTATCACTATTCTGTGCCAAAGCAGGGGCAGAACATGTCTATGCGGTTGAGTGCTCCCATATGGCTGACATGGCCAAGGAGATAGTTGAAACTAATGGTTACTCTAATGTTGTAACGGTTTTGAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTCCTAAAGTTGATATAATCATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGTGACAAATGGCTTGCTGATGATGGAATTGTGCTACCAGATAAAGCATCCCTCTACCTCACTGCCATTGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATTAAGAAGCAAGCCATAATGGAGCCTCTTGTTGACACAGTTGATCAGAATCAGATTGCTACAAACTGTCAACTACTCAAGACAATGGACATCTCAAAGATGACTCCTGGAGATTGTTCATTCACAGCACCTTTTAAGCTTGTTGCTGAACGTGACGATTATATTCATGCTCTTGTTGCATATTTTGATGTATCATTTACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGGCCAAGGTCACGAGCTACACATTGGAAACAAACTGTCCTATATCTGGAAGATATCTTGACAATTTGTGAGGGGGAGACAATTGTAGGGAGCATGACTGTGGCTCCAAACAAAAAAAATCCTCGGGATGTTGATATAATGCTCAAGTATTCATTGAATGGCAAGCGATGCAATGCTTCAAGGGTTCAGTATTACAAGATGCGTTGA 1227 0.401 MGRRKNKNQSNEDANNTNMSHLRFQDADEVIEDVAETSNIDQSMCFDHDDSDDKTSADYYFDSYSHFGNFSSNSSLALVLSFFIWEFTNLSKQSRSDKEKQEMLKDTVRTKTYQNVIYQNRFLFKNKIVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVETNGYSNVVTVLKGKIEEIELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLADDGIVLPDKASLYLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMTPGDCSFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQTVLYLEDILTICEGETIVGSMTVAPNKKNPRDVDIMLKYSLNGKRCNASRVQYYKMR. 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03155 408 MobiDBLite consensus disorder prediction 1 22 - -
Seca10g03155 408 FunFam probable protein arginine N-methyltransferase 1 89 230 - -
Seca10g03155 408 Gene3D Vaccinia Virus protein VP39 48 230 IPR029063 -
Seca10g03155 408 Pfam Ribosomal protein L11 methyltransferase (PrmA) 123 199 - -
Seca10g03155 408 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 101 407 IPR029063 -
Seca10g03155 408 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 57 388 IPR025799 GO:0016274|GO:0018216
Seca10g03155 408 FunFam Blast:Protein arginine N-methyltransferase 1 232 408 - -
Seca10g03155 408 CDD AdoMet_MTases 129 229 - -
Seca10g03155 408 Gene3D - 232 408 - -
Seca10g03155 408 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 19 395 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03155 Seca-Chr10 45554873 45557814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03155 101 370 C2H2 Transcription Factor Family AT3G12270 38.014 4.92e-58 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03155 K11434 - gmx:100781777 657.907