Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03120 ATGAATGTGCTTATTTGTTTTGGCAAAAAGTTACAACCTCTTTGTAGCGCTTTATGTCGAAGAGTTGCTTGTCTTAGCAAATCATGTTTCTTCTTAGTTGCATGTTTTTGTCGATTCATCCTCCGCAGAGCAAACCCTTTATGGGTTCAAATTGTCTATTTTGTGTCCCTTTCTTTCTTTGGGTTTGGTGTTCTCAAGGCTCTAAAGCCAAAAACAGGTTCTTTTAGTCCTAAAAGTTTAGATTTGTTCTTCACCTCTGTTTCAGCCACCACAGTTTCAAGCATGTCCACGGTTGAAATGGAGGTTTTTTCTAACTCTCAACTAATCATTATGATCATGTTGATGTTCATAGGTGGTGAGGTTTTTACCTCTATGGTAGGACTTCATTTCATTAGGTCCAGGCTCAAAACAGAATTAGATAAAATTGCTGCCTCACAAGCTCGTCTTAGAATTCCAAACCCCATGATTTTTGATCAAATTGAGCTAGAGTTAGGAATGGTCACAAATTCTAACCAAGAAAGTTCTATGCCTAAACCCAATGAGGTAAAAAATGAGTCTTCTCATGAGTCTTTGTGTGACACAAGTAAAAACTTGAGGTATTCATCTATGAGATTTTTGGGTTTTGTAGTTATAGCTTACATTCTAGTTGTTCATGTCATAGGGGTCTTTGTGGTGTCTCATTACCTTGCTTTTATTCCTAGTGCTAAAGAGGTGCTAGAGAAGAAAGGGATCAAAATGTTCACATTCTCTGTTTTCTCTGTAGTTTCAACTTTTGCAAGTTGTGGCTTTGTTCCAACAAATGAGAACATGGTTGTTTTTAGGAAGAATTCTGGTCTCCTTCTTATGCTTATTCCTCAAGTGCTTCTTGGGAACACATTGTTCCCTCCTTTCTTGAGGTTTTTGATATGGGTTTTGGGGAAATTTTACAAGAAAAAAGAGTGTAAGTACCTCCTTAAGAGTTCAGAGGAGGTTGGGTACAAACACTTGCTTCCAAGGCAGCACTCTGTTTTTCTGGTTGCAACTATTTTTGGGTTTATTATGGTTCAAGTTATATTGTTTTGTGTAATGGATTGGGATTCAGAAGGTTTGAAGGGGTTGAATGGATATCAAAAGTTCATTGGGGTGTTGTTCCAAAGCGTGAATTCCAGGCACACAGGAGAAACCATTTTGGACCTGTCAATTCTATCACATGCCATCTTGGTGTTATTTGTGGTTATGATGTACCTTCCTCCCTACACCTCTTTCCTTCCAATGAAAGATGATGGGCAAAATTCAGAAAGCTGTGAGAGATTAAAAAAGAGAAGAGGAAAAGTTATGGAGAATTTGATATTCTCTCAACTCTCCTATTTAGTCATATTCATCATACTCGTGTGCATAACTGAGAGGAAAAAATTGAAGGAGGATCCTCTCAATTTCAACGTCTTCAATATTGTTATTGAAGTGATCAGTGCATATGGGAACGTTGGGTTTACGACAGGGTACAGTTGTGAACGACAGTTGCATAAAGAGGCAAATTGCCAAGACAAGTGGATTGGATTTGTTGGAAAATGGAGCGATGAGGGAAAAATCATTCTCATATTCGTCATGTTGTTCGGAAGGCTCAAGAAATTCAATATGGATGGAGGCAAGGCATGGAAACTCCTCTGA 1647 0.3831 MNVLICFGKKLQPLCSALCRRVACLSKSCFFLVACFCRFILRRANPLWVQIVYFVSLSFFGFGVLKALKPKTGSFSPKSLDLFFTSVSATTVSSMSTVEMEVFSNSQLIIMIMLMFIGGEVFTSMVGLHFIRSRLKTELDKIAASQARLRIPNPMIFDQIELELGMVTNSNQESSMPKPNEVKNESSHESLCDTSKNLRYSSMRFLGFVVIAYILVVHVIGVFVVSHYLAFIPSAKEVLEKKGIKMFTFSVFSVVSTFASCGFVPTNENMVVFRKNSGLLLMLIPQVLLGNTLFPPFLRFLIWVLGKFYKKKECKYLLKSSEEVGYKHLLPRQHSVFLVATIFGFIMVQVILFCVMDWDSEGLKGLNGYQKFIGVLFQSVNSRHTGETILDLSILSHAILVLFVVMMYLPPYTSFLPMKDDGQNSESCERLKKRRGKVMENLIFSQLSYLVIFIILVCITERKKLKEDPLNFNVFNIVIEVISAYGNVGFTTGYSCERQLHKEANCQDKWIGFVGKWSDEGKIILIFVMLFGRLKKFNMDGGKAWKLL. 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03120 548 Pfam Cation transport protein 435 502 IPR003445 GO:0006812|GO:0008324|GO:0055085
Seca10g03120 548 Pfam Cation transport protein 197 409 IPR003445 GO:0006812|GO:0008324|GO:0055085
Seca10g03120 548 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 34 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03120 Seca-Chr10 45142184 45146954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03120 66 547 Inorganic Solute Cotransporters AT4G10310 48.577 3.91e-151 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03120 K24976 - vvi:100242150 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03120 10 45142184 45146954 Seca10g03120 10 45142184 45146954 ECH