Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03090 ATGGATTCATTAAGATCACGTAGATTTGTTTGTTGTAAGGAGGATCATCGAAAAACTGACAAAAGATCCTTTTTGGTTAAAAATCTTAGGGATGAGACAAAAACTGCATGTGAAGCAAGAATTGGACTTTGTGAAAAGAATGGGAAGCTTGTAATCCACGAGTTCGTGGAGGCCCATAACCACCCTTTACAGCTTGCAGAAACAACACATATGCTAGCATCACACCGTCAAATAACTAAGGTTCAAGCATATGAAATTGAAATGGCAGAGGACTCTGGATTGGCGCAAAAGGCTTCATTTCAGATTATGAGTGCACATGCAGGAAATAGAGCTAATCTTGGATATACACGGTTAGATTCCAAAAACTATCTCAAAGCAAGAAGACAACGTAGTATGGTATATGGGGAAGCTGGTAGTCTTATGAAGTATTTTCAACGCCAACAATTGGAGAATCCATCATTTTACCATGCATATCAAATGGACTGTGATGAACAAATCATAAATGTATTTTGGGCTGATGCAAAAATGATTTTAGATTATGGATATTTTGGTGATGTGATCTCTTTGGATACAACTTATTGTACTAATTGTGCTAATAGACCATTAACATTGTTTTCAGGCTTCAACCATTATAGGGGAACAATCATTTTTGGGCCTGCATTGTTGTATGATGAAACGAGTGAATCGTTTAAATGGTTATTTGAAACATTTCTTGAATCACATGGGAATAAAAAGCCTCAAAATTTGTTTACTGACCAAGAAAAAGCAATGGCTAAAGCACTAGCTGAGGTGATGCCAGAGATTCGACATGGCTTATGCACATGGCACTTGATGCAAAATGGGATCAAACACCTTGGTAACTTAATGAAAAGAGGAAGTTATTTCTTGACTGACTTTAAAAAGTGCATGTATGATTATGACCATGATGTGAAATTTGAGGTAGCTTGGAGCAAGTTGCTAGCTAAATATAATAGTGAAAACAATTGGGTGAAATCAGTGTATGCTATCAAAGAAAAATGGGCAACATGTCACATGAAGGAAAACACTCACCTTGGGAATACGAAACACTCAACTTAG 1077 0.3677 MDSLRSRRFVCCKEDHRKTDKRSFLVKNLRDETKTACEARIGLCEKNGKLVIHEFVEAHNHPLQLAETTHMLASHRQITKVQAYEIEMAEDSGLAQKASFQIMSAHAGNRANLGYTRLDSKNYLKARRQRSMVYGEAGSLMKYFQRQQLENPSFYHAYQMDCDEQIINVFWADAKMILDYGYFGDVISLDTTYCTNCANRPLTLFSGFNHYRGTIIFGPALLYDETSESFKWLFETFLESHGNKKPQNLFTDQEKAMAKALAEVMPEIRHGLCTWHLMQNGIKHLGNLMKRGSYFLTDFKKCMYDYDHDVKFEVAWSKLLAKYNSENNWVKSVYAIKEKWATCHMKENTHLGNTKHST. 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03090 358 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 347 IPR031052 GO:0006355
Seca10g03090 358 Pfam FAR1 DNA-binding domain 4 64 IPR004330 -
Seca10g03090 358 Pfam MULE transposase domain 186 280 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03090 Seca-Chr10 43828553 43829629 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g03090 MULE 4.1e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03090 - - mtr:112419311 550.051