Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03036 ATGAAATTCCATTTTGGTGATAGAGAAGTTGCCTTTAAGTTCTACAATTGGTATGCTAGAGTGAGAGGATTCTCAGCACGGAAGAACAAGACTGAAAAGGTGAAGAGTGGGGAAGTTGTGCGACAATCATTTGTGTGTTGTAGACACGGGACCCATATACCCACAACTCGTCCCCGTAAGCGGGCAGCAAGGCGGATATTAAGATGTGGCTGTAAAGCACAATGTAAGGTCTGTTTCTGCCATCAAACCAATAGATGGCATGTGACTGGGTTAATGGATGATCACAACCATAAGATGTTAGATGAAAGGTTCCAGGGCATGCTACCTTCGCATAGGAAGATGGACAGTGATGAAATAAAGCAAATGAAACTGATGAGAGATGTTGGAATTAGCACACCAAGCATATATCAATCGTTTGCTAGTAAAAGTGAGGGCTTTGAAAATGTGGGATTTCATACTCGTGATATGTACAATGAGATAGTAAACCAGAAGAGGATGCTAAAAAATGATGCTAATGAGGCTCTTGAATACCTTGATGAGCTTGCAAAGGGTGATACTGCAATGTTTGTTAGACACAAGGTTGACGATGAAGGGAGACTTGAACATTTGTTTTGGTGTGATGGGTTAAGCCAAGTGGACTATAAATTTTTTGGTGATGTCCTTGCTTTTGATGCGACATATGGGAAGAACAAATAA 696 0.4095 MKFHFGDREVAFKFYNWYARVRGFSARKNKTEKVKSGEVVRQSFVCCRHGTHIPTTRPRKRAARRILRCGCKAQCKVCFCHQTNRWHVTGLMDDHNHKMLDERFQGMLPSHRKMDSDEIKQMKLMRDVGISTPSIYQSFASKSEGFENVGFHTRDMYNEIVNQKRMLKNDANEALEYLDELAKGDTAMFVRHKVDDEGRLEHLFWCDGLSQVDYKFFGDVLAFDATYGKNK. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03036 231 PANTHER OS01G0519700 PROTEIN 4 223 - -
Seca10g03036 231 Pfam FAR1 DNA-binding domain 13 100 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03036 Seca-Chr10 42666771 42667466 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g03036 FAR1 8.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03036 - - mtr:112420123 232.261