Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03016 ATGGCTATATCCCCCTTTGGTGTAAACCCAGTTGTTGGAGCAAAACTATCTCCTGGTTCTCTAGAAGCAGTTACACTAGCTCACTGGATCTTCCAGAGCTATAGGCAAGTCTACTTATCTATAACCAGTTACTATTTGGGGACAGATTTACTGAGATCAGATTCTCTTGTTGGTGACATGATGCTGAAACATCTGCGGCATCATCAGGATGCCATTTTATGTTGTTCTTTGAAGTCGCAGCCAGTGTTCATCTTTGCAAATCAAGTTGGCCTTGACATGTTGGAAACAACTCTAGTGGCTTTACAATAA 309 0.4175 MAISPFGVNPVVGAKLSPGSLEAVTLAHWIFQSYRQVYLSITSYYLGTDLLRSDSLVGDMMLKHLRHHQDAILCCSLKSQPVFIFANQVGLDMLETTLVALQ. 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03016 102 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 102 IPR044830 GO:0003700
Seca10g03016 102 Pfam MEKHLA domain 25 102 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03016 Seca-Chr10 42091510 42092071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03016 1 102 Homeobox Transcription Factor Family AT5G60690 66.990 2.17e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03016 K09338 - gmx:100804870 159.844