Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03013 ATGGTTTTTGTTTCGAAAATTGTTTTCTTTGTCTGTATGTTGGTAACTATACTTGTTTCTTTGCAGTTCTACAGTGGCAATGCAACTGGAATACTACCTCACAAAGTGACTGTTGAAATAACCAACACGTTAAGTAATAATATGGAGTTGGGTGTTCATTGCAAAGACAAGCATCATGATCTTGGATTTCATGTTCTACCCGTTGGAGCAAGCTACAGCTTCAAATTTTTGCCTAATGTCTTCGTAGAAGTTACGTTGTACTTTTGTAAATTTACTTGGAAAACAGGAGAACACTACTTTGATATCTATGTTCAAGATCGAGATGATTGTGATAAAGTATGTCATTGGGAAATATTGGAAACAGGACCATGTGAGGCTAAGGCAGTGTCTCGAGAATGCTTTCAGTGGAACGATGCGATAAAGGCGATTTGGTGA 435 0.3747 MVFVSKIVFFVCMLVTILVSLQFYSGNATGILPHKVTVEITNTLSNNMELGVHCKDKHHDLGFHVLPVGASYSFKFLPNVFVEVTLYFCKFTWKTGEHYFDIYVQDRDDCDKVCHWEILETGPCEAKAVSRECFQWNDAIKAIW. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03013 144 Pfam Plant self-incompatibility protein S1 37 136 IPR010264 -
Seca10g03013 144 PANTHER - 33 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03013 Seca-Chr10 42065420 42065854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03013 28 137 Carbohydrate Esterase AT3G16970 38.655 2.21e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03013 - - pvu:PHAVU_004G003100g 150.599