Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03012 ATGATTTTTGTTTCGAAAATTGTTTTATCTCTCTGTATGTTGGTAACTATACTAGTTACTTTGCAGTTCAATTGTGGTAACGCAGGGCTACTACCTGGCAAAGTAGCTGTTGAAATAACCAATGTACTACGTGATTATCAGTTGACTGTTCATTGCAAAGACAAGCATCATGATCTTGGCCTTCATGTTTTGCCCACTGGAGGAACCTACAGATTCAAAGTTTTTCCTACTCCCATCATACATAATACATTGTACTTTTGCTTCTTTAGTTGGCCTACAGGAGGACACTACTTTAACATCTATGAGGAATCTCGAGATGTTTGTGATAACACATGTCATTGGGAAATCGAGGCATCAGGACCATGTAAGGTTAAGGAGGCGTCTCAGGAATGCTTTCAATGGAATAAACCCACAATGATAGCTTGA 426 0.3897 MIFVSKIVLSLCMLVTILVTLQFNCGNAGLLPGKVAVEITNVLRDYQLTVHCKDKHHDLGLHVLPTGGTYRFKVFPTPIIHNTLYFCFFSWPTGGHYFNIYEESRDVCDNTCHWEIEASGPCKVKEASQECFQWNKPTMIA. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03012 141 PANTHER - 33 125 IPR010264 -
Seca10g03012 141 Pfam Plant self-incompatibility protein S1 37 134 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03012 Seca-Chr10 41983095 41983520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03012 28 139 Carbohydrate Esterase AT3G16970 34.426 3.04e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03012 - - pvu:PHAVU_004G003100g 134.806