Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03011 ATGATTTTTGTTTCGAAAATTGTTTTATCTCTCTGTATGTTGGTAACTATACTAGTTACTTTGCAGTTCAATTGTGGTAACGCAGGGCTACTACCTGGCAAAGTAGTTGTTGAAATAACCAATGTACTACGTGATTATCAGTTGACTGTTCATTGCAAAGATAAGCATCATGATCTTGGCCTTCATGTTTTGCCCACTGGAGGAACCTACAGATTCAAAGTTTTTCCTACTCCCATCATACATAATACATTGTACTTTTGCTTCCTTAGTTGGCCTACAGGAGGACACTACTTTAACATCTATGAGGAATCTCGAGATGTTTGTGATAACACATGTCATTGGGAATTTTTACATCTTTTGATGATGATGTTATAA 375 0.36 MIFVSKIVLSLCMLVTILVTLQFNCGNAGLLPGKVVVEITNVLRDYQLTVHCKDKHHDLGLHVLPTGGTYRFKVFPTPIIHNTLYFCFLSWPTGGHYFNIYEESRDVCDNTCHWEFLHLLMMML. 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03011 124 PANTHER - 33 116 IPR010264 -
Seca10g03011 124 Pfam Plant self-incompatibility protein S1 37 115 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03011 Seca-Chr10 41895907 41896281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03011 28 106 Carbohydrate Esterase AT3G16970 36.250 6.67e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03011 - - pvu:PHAVU_004G003100g 104.375