Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03009 ATGGTTTTGCTTTCAAAAATTGTTTTATCTCTCTGTATGTTGATAATGGTAAGTATGCTAGTTGCTTTACAGTTCAATGGTGGTAACGCAGGGATAATACCTGAAATAACTGTTGTAATGGCCAACAAGTTAAATGGTTATCAGTTGGGTGTTCATTGCAAAGACAAGCATCATGATCTTGGCTTTCATGTTCTGCCCGTCGGAGGAATATATGGCTTCAAATTTCCTATTAATCCTTTCTTTCGTAATATATTGTACTTTTGCTTCTTTAGTTGGACTACCGAAGGACACTACTTTAACATCTATGTCCAAACTCGAGATCGTTGTGATTATTGTTATTGGGAAATTGTAGCATCAGGACCATGTTTGGTTTTTAAGGATAATCGAAAATGCTATTATTGGAATCAACCCACAAAGATAGAAGGGAACTACTTTTAG 438 0.3562 MVLLSKIVLSLCMLIMVSMLVALQFNGGNAGIIPEITVVMANKLNGYQLGVHCKDKHHDLGFHVLPVGGIYGFKFPINPFFRNILYFCFFSWTTEGHYFNIYVQTRDRCDYCYWEIVASGPCLVFKDNRKCYYWNQPTKIEGNYF. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03009 145 Pfam Plant self-incompatibility protein S1 37 134 IPR010264 -
Seca10g03009 145 PANTHER - 36 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03009 Seca-Chr10 41732667 41733104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03009 34 138 Carbohydrate Esterase AT3G16970 39.130 2.79e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03009 - - lang:109347126 119.012