Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03006 ATGGTTTTTGTTTCTAAAATTGTTGTATCTCTCGTTATGTTGGTAATGGTAACTATACTAGTTGCTTTGCAGTTCAATGGTGGTAATGCAAGGATAGTATTATTTGAAAGAACTGTTGCAATAGCCAACAAGTTAAATGATTATCAGTTGGGTGTTCATTGCAAAGACAAGAATCATGATCTTGGCTTTCATGTTCTGCCCGTCGGAGGAAGCTACAGCTTCAAATTTGTTGTTAATCCTTTAATTCGTAATACATTGTACTTTTGCTTTTTTAACTGGACTACCGGAGGACACTACTTTAACATCTATGTCCAAACTCGAGATCCTTGTTATTATTGTTATTGGGAAATCGTGGCATCAGGACCATGTTTGGTTTGGAGGGATAATCAGCAATGCTATTATTGGAATCAACTGACAAAGATAGCTTGA 429 0.3613 MVFVSKIVVSLVMLVMVTILVALQFNGGNARIVLFERTVAIANKLNDYQLGVHCKDKNHDLGFHVLPVGGSYSFKFVVNPLIRNTLYFCFFNWTTGGHYFNIYVQTRDPCYYCYWEIVASGPCLVWRDNQQCYYWNQLTKIA. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03006 142 PANTHER - 36 125 IPR010264 -
Seca10g03006 142 Pfam Plant self-incompatibility protein S1 38 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03006 Seca-Chr10 41477853 41478281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03006 38 139 Carbohydrate Esterase AT3G16970 37.500 2.85e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03006 - - cam:101507265 122.864