Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03005 ATGGTTTTTGTTTCGAAAATTGTTTTATCGCTTTATATGTTGGTAATGGTAACTATACTAGTTGCTTTGCAGTTCAATGGTGGTAACGCAGGGATAATACCTGAAAGAACTGTTGCAATAGCCAACAAGTTAAATGATTATCAGTTGAGTGTTCATTGCAAAGACAAGGATCATGATCTTGGCTTTCATGTTCTGCCCGTCGGAGGAAGCTACAGCTTCAAATTTGTTGTTAATCCTTTAATTCCTAATACATTGTACTTTTGCTTCTTTAGTTGGACTACTGGAGGACACTACTTTAACATCTATGTCCAAACTCGAGATGTTTGTTCTTATTGTTATTGGGAAATCGTGACATCAGGACCATGTCTGGTTTGGAAGGATAATCGGGAATGCTATAATTGGAATCAACCCACAAAGATAGCTTGA 426 0.3709 MVFVSKIVLSLYMLVMVTILVALQFNGGNAGIIPERTVAIANKLNDYQLSVHCKDKDHDLGFHVLPVGGSYSFKFVVNPLIPNTLYFCFFSWTTGGHYFNIYVQTRDVCSYCYWEIVTSGPCLVWKDNRECYNWNQPTKIA. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03005 141 PANTHER - 34 125 IPR010264 -
Seca10g03005 141 Pfam Plant self-incompatibility protein S1 37 134 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03005 Seca-Chr10 41115855 41116280 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03005 34 138 Carbohydrate Esterase AT3G16970 37.391 5.05e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03005 - - lang:109347126 123.25