Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03003 ATGGTTTTTGTTTCGAAAATTGTTTCATCTCTCTGTATGTTGGTAATGGCAACTATACTAGTTGCTTTGCAGTTCAATGGTGGTAACGCAGGGATAATACCTGAAAGAACTGTTGCGATAGCAAACAAGTTAAATGATTATCAGTTGGGTGTTCATTGCAAAGACAAGAATCATGATCTTGGCTTTCATGTTCTGCCAGTCGGAGGAAGCTACAACTTCAAATTTGTTGTTGATCCTTTCGTTCATAATACATTGTACTTTTGCTTCTTTAGTTGGACTACCGGAGGACACTACTTTAACATCTACGTCCAAACTCGAGATCTTTGTTCTTATTGTTATTGGGAAATCGTGGCATCAGGCCCTTGTTTGGTTTGGAAGGATAATCGGCAATGCTATAATTGGAATCAACCCACAAAGATAGCTTGA 426 0.385 MVFVSKIVSSLCMLVMATILVALQFNGGNAGIIPERTVAIANKLNDYQLGVHCKDKNHDLGFHVLPVGGSYNFKFVVDPFVHNTLYFCFFSWTTGGHYFNIYVQTRDLCSYCYWEIVASGPCLVWKDNRQCYNWNQPTKIA. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03003 141 Pfam Plant self-incompatibility protein S1 37 134 IPR010264 -
Seca10g03003 141 PANTHER - 34 125 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03003 Seca-Chr10 40920724 40921149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03003 34 136 Carbohydrate Esterase AT3G16970 38.938 2.60e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03003 - - pvu:PHAVU_004G003100g 124.405