Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02992 ATGTTTGCCTATACAGCAATTGTTGTAGTAGTAGTAGTACTCCTCACCTTCCTTTATATTTTCCATCACAGAAAAAACCCCGCCTTAATAAACTGGCCTTTTCTTGGTATGTTACCACAAGCCCTCTTGAACTTGTGGCGCATCTATGATTTCATAACTGATGACTTGAAATCACAAGGTGGCACTTCAGAGTTCAAAGGACCTTGGTTTACCAACATGGATTGTATTGTCACTGGTGATCCAATGAATGTGCATCACATAATGAGCAAGAGTTTTGACAACTATATTTTTCAAGCTTTTGGTGATGGGATATTCACTGCTGATTCAGAATCATGGAAATACAACAGGACTCTGTTCCATTCTCTGTTTAAACAGAGAAGCTTTGAGGTGCTTCAAGAGAAAATCATTCATAAAAAGGTGCAAAGAAGCTTACTTCCTATATTGGATCATGTACAACAACAAGGATCAGTGGTTGATCTACAAGATGTTTTCAATCGCTTCACATTTGATAACATATGTTCCCTTGTTCTTGGATATGATCCTAATTGCCTTTCTATTCACTTCCCTGAAGTTGCATGTGAAAAGGCTTTTAACCAAGCAGAAGAATGCATATTCTATAGACACACAGTTCCAATGTGTGTTTGGAAGTTTCAAAAATGGCTTCAAATTGGTCAAGAGAAGAAGATGACTGAAGCATGGAAAATATTTGACCAGTTTCTATATGCATGTATAGCATCCAAGCGTGAAGAGCTAAGCAAGTATAGCAGAAATCAAATGGGTGCTGAGACTCAAGTTGATTTGCTAACAGCTTTGATGAGATCAGAAGAAAAAGGACAAGTACATGATGACAAGTTCCTAAGAGATGCAGCATTCAATCTTTTTGTAGCAGGGAGAGATACCATTACTTCAGCACTCACATGGTTCTTTTGGCTTGTTGCTACAAACCCATTAGTGGAATCCAAGATTCTTGAAGAGATCAAAGACAATTTTGGGGCCAAAGAAAAAAAGCATGGCCTTTTATTAGGCATGGAGGAGGTGAAAAAGCTAGTTTATCTGCATGGTGCTATATGTGAAACTTTGAGACTTTTTCCTCCAATACCTTTTGAGAGGAAGCAAGCAATTAAAGCTGATACACTTCCTAGTGGTCACCATATTGATCCCAAAACAATGATATTATTCTCTTTGTATTCAATGGGGAGATTTGAAGATCTATGGGGGAATGATTGTTTGGAGTTTAAGCCAGAGAGATGGATTTCTGAGAGAGGAAGCATTGTTTATGCACCATCTTACAAGTTCATTAGTTTCAATGCAGGACCAAGGACTTGCTTGGGAAAAGACTTGTCCTTTATTCAAATGAAGATGGTGGCAACTGCTATTTTGTGCAACTATAGTATCCAAGTGGTGGAAGGTAACTGTGCCACCCCAAGGCATTCTATTGTACTTCTCATGAAGCATGGTCTTAAGGTTAGGATTACAAAAAGGGGAATTTGA 1491 0.3836 MFAYTAIVVVVVVLLTFLYIFHHRKNPALINWPFLGMLPQALLNLWRIYDFITDDLKSQGGTSEFKGPWFTNMDCIVTGDPMNVHHIMSKSFDNYIFQAFGDGIFTADSESWKYNRTLFHSLFKQRSFEVLQEKIIHKKVQRSLLPILDHVQQQGSVVDLQDVFNRFTFDNICSLVLGYDPNCLSIHFPEVACEKAFNQAEECIFYRHTVPMCVWKFQKWLQIGQEKKMTEAWKIFDQFLYACIASKREELSKYSRNQMGAETQVDLLTALMRSEEKGQVHDDKFLRDAAFNLFVAGRDTITSALTWFFWLVATNPLVESKILEEIKDNFGAKEKKHGLLLGMEEVKKLVYLHGAICETLRLFPPIPFERKQAIKADTLPSGHHIDPKTMILFSLYSMGRFEDLWGNDCLEFKPERWISERGSIVYAPSYKFISFNAGPRTCLGKDLSFIQMKMVATAILCNYSIQVVEGNCATPRHSIVLLMKHGLKVRITKRGI. 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02992 496 PANTHER CYTOCHROME P450 18 489 - -
Seca10g02992 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Seca10g02992 496 Gene3D Cytochrome P450 16 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02992 496 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02992 496 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02992 496 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02992 496 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02992 496 CDD CYP86A 64 487 - -
Seca10g02992 496 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02992 496 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02992 496 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02992 496 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02992 496 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02992 496 Pfam Cytochrome P450 89 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02992 496 SUPERFAMILY Cytochrome P450 29 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02992 Seca-Chr10 40657467 40658981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02992 8 495 Cytochrome P450 AT2G23180 46.457 3.28e-162 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02992 - - gmx:100779590 737.258