Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02987 ATGGCCATTCTAGTTCTAACAACAATTGTAGCATTCTTTTGCTTCCTATACATCTTTCACAGGAGACTATGTTGTAGATACCCCCTCTTGATGGACTTTCCTATCCTTGGCATGTTACCACAAGTCCTTTGGAACTTGTGGCGTATCCATGATTTCATTACCGAGGTATTGAAACAACATAGGGGTACAGGGGAATTCATGGGACCATGGTTTACCAAAATGAACTACATGATCACTTGTGACCCCATCAATGTGCACCACATTATGAGCAAGAGTTTTGACAACTATGTGAAGGGTCCTGATTTTCGTGAGATTTTTCAACCTTTCGGAGATGGGATAGTCACTGCTGATTCAGACACATGGAAATACATTAGGTCTCTCTTAATTTCTCTGATTAAACACAGAGGCTTTGAGGTGTATTTTGAGAAAACCATTCAGAAGAAGGTGCAGAGTAGCCTACTTCCTCTATTGGATCATGTACAACAAGAAGGGATAGTGGTAGATCTACAAGATGTCTTCAATCGCTTCACATTTGATAACACATCCTCAATTGTTCTAGGATGTGATCCTAATTGTCTTTCCATTGATTTCCCTGAAGTTGCATGTGAGAAGGCTTTTAATGAAGCAGAGGAATCCATATTCTATAGACACACAGTGCCAATGTGTGTTTGGAAGTTGCAAAAATGGCTTCAAATTGGTCAAGAGAAAAAGATGACCAAAGCATGCAAAATATTTGATGAATTCCTCTATTCATGTATAGAGTCTAAGAGAAAAGAGGTAAACAAAAATGAAAAGGTTGAAGCTCATGTTGACCTTCTAACAGCTTTGATGAGAGCAGAAAAAGGAAGAGTACATAATGACAAGTTTCTAAGGGATGCTGCATTTAACCTTTTTGTAGCAGGGAGAGAAACTATAACTTCAGCTCTTACATGGTTCTTCTGGCTTGTTGTTACAAACCCATCAGTGGAAGCTAAGATTCTTGAAGAGATCGAAGATAATTTTGGAGCCAAAGAAAAGAAGCATGGGCTTTTATTAGGCATGGAGGAGGTGAAACAGCTAGTTTATCTTCATGGTGCTATATGTGAAGCTCTAAGACTTTTCCCTCCTATACCTGTTGAGCGCAAGCAAGCAATTAAAGCTGATCTACTTCCAAGTGGTCACCATATTAATCCCAATACAATGGTGTTATTTTCTTCATATGCAATGGGGAGATTTGAAGAAATATGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATCTCTAACAGAGGAGGCATTGTTTATGCACCATCTTATAAGTTTATAAGTTTTAATGCAGGACCAAGGACTTGTTTGGGAAAAGATTTGTCTTTCATTGAAATGAAGATGATGGCAGCTGCTATTTTGTGTGACTATCATGTTCAACTTGTGGAAGGTCATGTTGTTACCCCAGGCCATTCAATTGTACTTCTTATGAAGAATGGTTTGAAGGTTAGGATAACAAAAAGAGAAATTTGA 1503 0.3852 MAILVLTTIVAFFCFLYIFHRRLCCRYPLLMDFPILGMLPQVLWNLWRIHDFITEVLKQHRGTGEFMGPWFTKMNYMITCDPINVHHIMSKSFDNYVKGPDFREIFQPFGDGIVTADSDTWKYIRSLLISLIKHRGFEVYFEKTIQKKVQSSLLPLLDHVQQEGIVVDLQDVFNRFTFDNTSSIVLGCDPNCLSIDFPEVACEKAFNEAEESIFYRHTVPMCVWKLQKWLQIGQEKKMTKACKIFDEFLYSCIESKRKEVNKNEKVEAHVDLLTALMRAEKGRVHNDKFLRDAAFNLFVAGRETITSALTWFFWLVVTNPSVEAKILEEIEDNFGAKEKKHGLLLGMEEVKQLVYLHGAICEALRLFPPIPVERKQAIKADLLPSGHHINPNTMVLFSSYAMGRFEEIWGKDCLEFKPERWISNRGGIVYAPSYKFISFNAGPRTCLGKDLSFIEMKMMAAAILCDYHVQLVEGHVVTPGHSIVLLMKNGLKVRITKREI. 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02987 500 PANTHER CYTOCHROME P450 18 493 - -
Seca10g02987 500 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 CDD CYP86A 65 491 - -
Seca10g02987 500 SUPERFAMILY Cytochrome P450 17 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 Pfam Cytochrome P450 34 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02987 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02987 Seca-Chr10 40332040 40333542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02987 10 498 Cytochrome P450 AT4G39490 45.010 4.44e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02987 - - gmx:100792360 751.895