Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02986 ATGGCCATTCTAGTTTTAGCAACAATTGTAGCATTCTTTTGCTTCCTATACATCTTTCATAGGAGACAATGTTGTAGATACCCCCTTTTGATAGACTTTCCTATCCTTGGCATGTTACCACAAGTCCTTTGGAACTTGTGGCGTATCCATGATTTCATTACCGAAGTATTGAAACAACATAGGGGCACAGGGGAATTCATGGGACCATGGTTTACCAAAATGAACTACATGGTCACTAGTGACCCCATCAATGTGCACCATATTCTGAGCAAGAGTTTTCACAACTATGTGAAGGGTCCTGATTTTCGTGAGATTTTTCAACCTTTCGGAGATGGGATAGCCACTGTTGATTCAAACGAATGGAAATACATTAGGTCTCTCCTAATTTCTCTGATTAAACAGAGAAGCTTTGATGTTCTTCAAGAGAAAATCATTCAGAAGAACATGCAGAGAAGCTTACTTCCTCTATTGGATCATGTACAACAACAAGGGACAGTGGTGGATCTACAAGATGTCTTAAATCGATTCACATTTGATAACATATCCTCCATTGTTCTAGGATGTGATCCTAATTGTCTTTCCATTGATTTCCCTGAAGTTGCTTTTGAGAAGGCTTTTAATGAAGCAGAGGAATCCATATTCTATAGACACACAGTGCCAATGTGTGTTTGGAAGTTGCAAAAGTGGCTTCAAATTGGTCAAGAGAAGAAAATGACCAAAGCATGCAACATATTTGATGAATTCATTTATTCATGTCTAGAGTCTAAGAGAAAAGAGGTAAACAAAAATGAAAAGGTTAAAGCTCATGTTGACCTTCTAACAGCTTTGATGAGAGCAGAAAATGGAAGAGTACATGATGACAAGTTTCTAAGGGATACTGTATTTAACCTTTTTGTAGCAGGGAGAGAAGCCATAACTTCAACTCTTACATGGTTCTTCTGGCTTGTTGTTACAAACCCATCAGTGGAAGCTAAGATTCTTGAAGAGATCAAAGATAATTTTGGGGCCAAAGAAAAGAAGCATGGGCTTTTATTAGGCATAGAGGAGGTGAAAAAGCTAGTTTATCTTCATGGTGCTATATGTGAAGCTCTAAGACTTTTCCCTCCTGTACCTGTTGAGCGTAAGCAAGCAATTAAAGCTGATATACTTCCAAGTGGTCACCATATCAATCCCAATACAATGATATTATTTTCTTCATATGCAATGGGGAGATTTGAAGAAATATGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATCTCTAACAGAGGAGGCACTGTTTATGTACCATCTTATAAGTTCATAAGTTTTAATGCAGGACCAAGGATTTGTTTGGGAAAGGACTTGGCCTTCATTCAAATGAAGATGGTGGCAGCTGCTATTTTGTGTGACTATCATGTCCAACTTGTGGAAGGTCATGTTGCTACCCCAAGCCATTCAGTTATACTTTTTATGTATTAA 1467 0.3824 MAILVLATIVAFFCFLYIFHRRQCCRYPLLIDFPILGMLPQVLWNLWRIHDFITEVLKQHRGTGEFMGPWFTKMNYMVTSDPINVHHILSKSFHNYVKGPDFREIFQPFGDGIATVDSNEWKYIRSLLISLIKQRSFDVLQEKIIQKNMQRSLLPLLDHVQQQGTVVDLQDVLNRFTFDNISSIVLGCDPNCLSIDFPEVAFEKAFNEAEESIFYRHTVPMCVWKLQKWLQIGQEKKMTKACNIFDEFIYSCLESKRKEVNKNEKVKAHVDLLTALMRAENGRVHDDKFLRDTVFNLFVAGREAITSTLTWFFWLVVTNPSVEAKILEEIKDNFGAKEKKHGLLLGIEEVKKLVYLHGAICEALRLFPPVPVERKQAIKADILPSGHHINPNTMILFSSYAMGRFEEIWGKDCLEFKPERWISNRGGTVYVPSYKFISFNAGPRICLGKDLAFIQMKMVAAAILCDYHVQLVEGHVATPSHSVILFMY. 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02986 488 SUPERFAMILY Cytochrome P450 17 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02986 488 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02986 488 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02986 488 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02986 488 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02986 488 Gene3D Cytochrome P450 32 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02986 488 PANTHER CYTOCHROME P450 24 475 - -
Seca10g02986 488 CDD CYP86A 65 487 - -
Seca10g02986 488 Pfam Cytochrome P450 34 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02986 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Seca10g02986 488 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02986 488 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02986 488 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02986 488 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g02986 488 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02986 Seca-Chr10 40275297 40283540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02986 10 487 Cytochrome P450 AT4G39490 44.800 5.14e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02986 - - gmx:100792360 719.924