Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02974 ATGGATGTTGGGGATGGGCAATATAAGAGGATAACAGATCTGACTGGTGATGATATAAGGGGTTTGAAGTTTGTTACTCAACATGTTGCTTACAATTTTTACAAGGATTATGCTAAAGCTCATGGTTTTGTAGTAAGGAAAGATGATAGAAAGAAGGATTTTAGGGGTAACATTGTGATGCGGCAATTTGTATGCAATAGATAA 204 0.3578 MDVGDGQYKRITDLTGDDIRGLKFVTQHVAYNFYKDYAKAHGFVVRKDDRKKDFRGNIVMRQFVCNR. 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02974 67 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 67 - -
Seca10g02974 67 Pfam FAR1 DNA-binding domain 32 67 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02974 Seca-Chr10 40000597 40000800 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g02974 FAR1 7.1e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02974 - - ccaj:109792835 89.3521